Click here to switch to the map view.

The map label for this gene is 150397126

Identifier: 150397126

GI number: 150397126

Start: 1979881

End: 1980408

Strand: Direct

Name: 150397126

Synonym: Smed_1924

Alternate gene names: NA

Gene position: 1979881-1980408 (Clockwise)

Preceding gene: 150397125

Following gene: 150397127

Centisome position: 52.35

GC content: 62.12

Gene sequence:

>528_bases
ATGGCCATGCCCGACCTTGACTACAACCTTCATCGCCAGACCGAGGCGGCAAAGTCGCTTCTGTCCAGCCTTCGCGACCA
AGGCGTTGACGATGACGCCGATCTGGTCGCCGACGCGATAGAGGGCGAAACCAACCTCCTCGAGGCTATCGAAGCCGCCC
TTGCGCAGATCGACGAGTGCGACGTCCTCATCACCGGTTTGAAAGCCAAGGAAGAGGAATTCGAGACCCGCCGCAAGTCG
ATTGAGCGCCGAGCCGAGCGCGTCCGAGCCCTGATCGAACAGGCGATGTTAGCTACCGATCAAACGTCGCTAAAGCTGCC
GACAGCCACCCTGTCGCTCACGAAGCGCGCGCCCGGCCTGATCGTCAACAGCGAAGCGGACATCCCTTCCCGCTTCTTCG
TCGAGCAAGAGCGCCCCGCGCCGAAGCTGGACAAGAAGGCTTTGGCCGCCGCGATCAAAGCCGGCGAGCAAGTGCCCGGC
GCCAACCTCGACAACGGCAGCATCTCTCTTTCCGTCCGGAGGAAGTAA

Upstream 100 bases:

>100_bases
TGTGCCTGATCCTGATCGCCCTCCTCCTCGGCATTTTCGCCGCGGGCCTTTGGCGGACGGAACAGGTGCACAAAGCAATC
GTCGCCGAAAGGAATGTCTA

Downstream 100 bases:

>100_bases
TCCATGAACGCAATCACGAAATTCGACCTGTCGCCGCGCCAGATTGCGCTGGTCCAGCAGACCGTGGCCAAAGACTGCAA
CGCCGACGAGTTCAACTTGT

Product: siphovirus Gp157 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MAMPDLDYNLHRQTEAAKSLLSSLRDQGVDDDADLVADAIEGETNLLEAIEAALAQIDECDVLITGLKAKEEEFETRRKS
IERRAERVRALIEQAMLATDQTSLKLPTATLSLTKRAPGLIVNSEADIPSRFFVEQERPAPKLDKKALAAAIKAGEQVPG
ANLDNGSISLSVRRK

Sequences:

>Translated_175_residues
MAMPDLDYNLHRQTEAAKSLLSSLRDQGVDDDADLVADAIEGETNLLEAIEAALAQIDECDVLITGLKAKEEEFETRRKS
IERRAERVRALIEQAMLATDQTSLKLPTATLSLTKRAPGLIVNSEADIPSRFFVEQERPAPKLDKKALAAAIKAGEQVPG
ANLDNGSISLSVRRK
>Mature_174_residues
AMPDLDYNLHRQTEAAKSLLSSLRDQGVDDDADLVADAIEGETNLLEAIEAALAQIDECDVLITGLKAKEEEFETRRKSI
ERRAERVRALIEQAMLATDQTSLKLPTATLSLTKRAPGLIVNSEADIPSRFFVEQERPAPKLDKKALAAAIKAGEQVPGA
NLDNGSISLSVRRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19109; Mature: 18978

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMPDLDYNLHRQTEAAKSLLSSLRDQGVDDDADLVADAIEGETNLLEAIEAALAQIDEC
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
DVLITGLKAKEEEFETRRKSIERRAERVRALIEQAMLATDQTSLKLPTATLSLTKRAPGL
HHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCE
IVNSEADIPSRFFVEQERPAPKLDKKALAAAIKAGEQVPGANLDNGSISLSVRRK
EEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
AMPDLDYNLHRQTEAAKSLLSSLRDQGVDDDADLVADAIEGETNLLEAIEAALAQIDEC
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
DVLITGLKAKEEEFETRRKSIERRAERVRALIEQAMLATDQTSLKLPTATLSLTKRAPGL
HHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCE
IVNSEADIPSRFFVEQERPAPKLDKKALAAAIKAGEQVPGANLDNGSISLSVRRK
EEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA