| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397122
Identifier: 150397122
GI number: 150397122
Start: 1977344
End: 1977973
Strand: Direct
Name: 150397122
Synonym: Smed_1920
Alternate gene names: NA
Gene position: 1977344-1977973 (Clockwise)
Preceding gene: 150397121
Following gene: 150397124
Centisome position: 52.28
GC content: 59.21
Gene sequence:
>630_bases ATGGGCGAGCTTGTTGAAGGGGATGACGGGCTCCCTGCTGAGGACGTCGGGCCATGGGCTATTGAAAAATACAACTATCT CTGTCGGTACGTTGACATCTCGCGCGGTGCTCGCGGTAAGTTCATAGGACCAGGCAAGGCCGGCGCCACTTACCTTGACC TTTTCTGTGGCCCAGGGCGAGCGAAGGTGAGGAACGGCGAATTCACCGACGGCGGCTGTGTTGCTGCCTGGCGCAAGAGC GTTGCTGGCGGGGGGCCGTTTTCTCAGGTCTTCATTGCCGACATTGACGAGGTCCGCTTGAATGCCGCGGCGGAACGCCT GAAGCAGGCCGGCGCACCGGTCACAGCCTTTCACGGGCCGGCCCTGCAGACGGTTGAAAGTATTCTCAAGCGACTAGATC CGTATGGGCTTCACTTCGCGTTCCTCGACCCGTTTAGCCTCGGGGTCCTCGACTTCCGGATTTTCCAGAAGCTGGCGAAA AGGAAGCGCATGGATATCCTTGTGCATCTCAGCAAAATGGACCTTCAGCGCAATCTTGGGCGTAACTTGGCAGCCGACGT TTCAGCCTTCGATGCATTCGCTCCCGGTTGGAGGAGCGATCGACGCCGCCCAAGGCCAGCAAGGCATTAG
Upstream 100 bases:
>100_bases TGCAGCCGGGAGTCGAGTCGGTTTTCAGAAATATTTAGCTTGCCACAACAGGTAGCGATGCGACTGATGGCGAGCCCAAG ATATCCGCGGGGGCGATTAG
Downstream 100 bases:
>100_bases AGTTGAACTGATCAACTACTGGAAGACCCTCGTCAAGAATCTCGGGATCGCGGCATCGGCGGAGATGAAGCTTCTGAAGG GTGAAAAAGACCAGCACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MGELVEGDDGLPAEDVGPWAIEKYNYLCRYVDISRGARGKFIGPGKAGATYLDLFCGPGRAKVRNGEFTDGGCVAAWRKS VAGGGPFSQVFIADIDEVRLNAAAERLKQAGAPVTAFHGPALQTVESILKRLDPYGLHFAFLDPFSLGVLDFRIFQKLAK RKRMDILVHLSKMDLQRNLGRNLAADVSAFDAFAPGWRSDRRRPRPARH
Sequences:
>Translated_209_residues MGELVEGDDGLPAEDVGPWAIEKYNYLCRYVDISRGARGKFIGPGKAGATYLDLFCGPGRAKVRNGEFTDGGCVAAWRKS VAGGGPFSQVFIADIDEVRLNAAAERLKQAGAPVTAFHGPALQTVESILKRLDPYGLHFAFLDPFSLGVLDFRIFQKLAK RKRMDILVHLSKMDLQRNLGRNLAADVSAFDAFAPGWRSDRRRPRPARH >Mature_208_residues GELVEGDDGLPAEDVGPWAIEKYNYLCRYVDISRGARGKFIGPGKAGATYLDLFCGPGRAKVRNGEFTDGGCVAAWRKSV AGGGPFSQVFIADIDEVRLNAAAERLKQAGAPVTAFHGPALQTVESILKRLDPYGLHFAFLDPFSLGVLDFRIFQKLAKR KRMDILVHLSKMDLQRNLGRNLAADVSAFDAFAPGWRSDRRRPRPARH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22990; Mature: 22858
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGELVEGDDGLPAEDVGPWAIEKYNYLCRYVDISRGARGKFIGPGKAGATYLDLFCGPGR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEECCCC AKVRNGEFTDGGCVAAWRKSVAGGGPFSQVFIADIDEVRLNAAAERLKQAGAPVTAFHGP CEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCH ALQTVESILKRLDPYGLHFAFLDPFSLGVLDFRIFQKLAKRKRMDILVHLSKMDLQRNLG HHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RNLAADVSAFDAFAPGWRSDRRRPRPARH CCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure GELVEGDDGLPAEDVGPWAIEKYNYLCRYVDISRGARGKFIGPGKAGATYLDLFCGPGR CCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEECCCC AKVRNGEFTDGGCVAAWRKSVAGGGPFSQVFIADIDEVRLNAAAERLKQAGAPVTAFHGP CEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCH ALQTVESILKRLDPYGLHFAFLDPFSLGVLDFRIFQKLAKRKRMDILVHLSKMDLQRNLG HHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RNLAADVSAFDAFAPGWRSDRRRPRPARH CCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA