Click here to switch to the map view.

The map label for this gene is 150397116

Identifier: 150397116

GI number: 150397116

Start: 1973293

End: 1974060

Strand: Reverse

Name: 150397116

Synonym: Smed_1914

Alternate gene names: NA

Gene position: 1974060-1973293 (Counterclockwise)

Preceding gene: 150397117

Following gene: 150397115

Centisome position: 52.2

GC content: 61.59

Gene sequence:

>768_bases
GTGAGAAGTTCCTCCGCTGGATGCGCCGGAAACGGCCAAGGGAATAATCGGCCTTTCCCAACCCAAACGACTTTACCTTT
CCCTACCGTCAGCCGGAGCCGAACAAGATCCCTGCGTGTTCTTGTCACCTGCGAGTTCTCCGGCACGGTCCGGGATGCGT
TCCTCGATCGCGGTCATGATGCATGGTCCTGCGATCTGTTGCCGGCAGAAAACGGCAGCAACCGGCACATCCGTGGCGAT
GCACGCGACGTTCTAAACGACGGATGGGACATGCTGATCGTCGCGCATCCTCCATGCACGCGGCTCTGCAATAGCGGCGT
TCGCTGGCTGTCCGTCCCGCCGCCTGGCAAGAATGCCGAACAAATGTGGGCTGAGCTCGACGAAGGCGCTGCGTTATTCT
CCGCCTTCTGGAATGCGCCGGTCGACCGCATCTGCATCGAAAATCCCGTTATGCATCGGCATGCGAAGGAACGCATCGCC
GACTTTCGGCCGCCTGCCCAAACCGTCCAGCCGTGGTGGTTCGGCGAACCGTTTTTCAAGGCTACCGGTCTCTACCTGCG
CAACCTGCCGACCCTGCTTCCGACACAGAAGTTGACACCGCCGGCTCGCGGCACGGCCGAGCACAAGGCGTGGTCACGGG
TGCATCGAATGTCACCTGGCCCGGACCGAGGGAGGGAGCGCTCACGCTTCTTCCCGGGCATCGCCGCCGCCATGGCGGAT
CAATGGTGCGATTTCGCAATTGAGCAGTTCCTTCGCGAGGCAGCATGA

Upstream 100 bases:

>100_bases
CGGCGGCCAAGCATCGGACCGAACGCCATGCACTGAGGAAAGCCCATGCGACTGCTGACAAGCGCTCTGGTGAGAGCGTG
GGAATGGGGGAGGCTTCAAA

Downstream 100 bases:

>100_bases
TCACCACCGCCATCATCGAATGGGCCGAAGCCCAGAAGCGCCAGAAGTTCACCTGGCTCGAAGATCACGGTCCACGCTCT
AAGCGCCCGCGTCCTGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRSSSAGCAGNGQGNNRPFPTQTTLPFPTVSRSRTRSLRVLVTCEFSGTVRDAFLDRGHDAWSCDLLPAENGSNRHIRGD
ARDVLNDGWDMLIVAHPPCTRLCNSGVRWLSVPPPGKNAEQMWAELDEGAALFSAFWNAPVDRICIENPVMHRHAKERIA
DFRPPAQTVQPWWFGEPFFKATGLYLRNLPTLLPTQKLTPPARGTAEHKAWSRVHRMSPGPDRGRERSRFFPGIAAAMAD
QWCDFAIEQFLREAA

Sequences:

>Translated_255_residues
MRSSSAGCAGNGQGNNRPFPTQTTLPFPTVSRSRTRSLRVLVTCEFSGTVRDAFLDRGHDAWSCDLLPAENGSNRHIRGD
ARDVLNDGWDMLIVAHPPCTRLCNSGVRWLSVPPPGKNAEQMWAELDEGAALFSAFWNAPVDRICIENPVMHRHAKERIA
DFRPPAQTVQPWWFGEPFFKATGLYLRNLPTLLPTQKLTPPARGTAEHKAWSRVHRMSPGPDRGRERSRFFPGIAAAMAD
QWCDFAIEQFLREAA
>Mature_255_residues
MRSSSAGCAGNGQGNNRPFPTQTTLPFPTVSRSRTRSLRVLVTCEFSGTVRDAFLDRGHDAWSCDLLPAENGSNRHIRGD
ARDVLNDGWDMLIVAHPPCTRLCNSGVRWLSVPPPGKNAEQMWAELDEGAALFSAFWNAPVDRICIENPVMHRHAKERIA
DFRPPAQTVQPWWFGEPFFKATGLYLRNLPTLLPTQKLTPPARGTAEHKAWSRVHRMSPGPDRGRERSRFFPGIAAAMAD
QWCDFAIEQFLREAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28563; Mature: 28563

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSSAGCAGNGQGNNRPFPTQTTLPFPTVSRSRTRSLRVLVTCEFSGTVRDAFLDRGHD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCC
AWSCDLLPAENGSNRHIRGDARDVLNDGWDMLIVAHPPCTRLCNSGVRWLSVPPPGKNAE
CEEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHCCCEEEECCCCCCCHH
QMWAELDEGAALFSAFWNAPVDRICIENPVMHRHAKERIADFRPPAQTVQPWWFGEPFFK
HHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHH
ATGLYLRNLPTLLPTQKLTPPARGTAEHKAWSRVHRMSPGPDRGRERSRFFPGIAAAMAD
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHH
QWCDFAIEQFLREAA
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSSSAGCAGNGQGNNRPFPTQTTLPFPTVSRSRTRSLRVLVTCEFSGTVRDAFLDRGHD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCC
AWSCDLLPAENGSNRHIRGDARDVLNDGWDMLIVAHPPCTRLCNSGVRWLSVPPPGKNAE
CEEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHCCCEEEECCCCCCCHH
QMWAELDEGAALFSAFWNAPVDRICIENPVMHRHAKERIADFRPPAQTVQPWWFGEPFFK
HHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHH
ATGLYLRNLPTLLPTQKLTPPARGTAEHKAWSRVHRMSPGPDRGRERSRFFPGIAAAMAD
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHH
QWCDFAIEQFLREAA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA