Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150397114

Identifier: 150397114

GI number: 150397114

Start: 1972866

End: 1973111

Strand: Direct

Name: 150397114

Synonym: Smed_1912

Alternate gene names: NA

Gene position: 1972866-1973111 (Clockwise)

Preceding gene: 150397105

Following gene: 150397120

Centisome position: 52.17

GC content: 58.13

Gene sequence:

>246_bases
ATGGCTGAGAACTGGGACGAATGCGTAATCATCGATCTGCCCAATCTCGAAGGCGTTCAAATCGTGTGGTCGCCCGCTTA
TGCAGCTCAATTGCTTAGTGAAAACTGGCCGGACACGAAGGGACGAAGCTATTCCGCGGCGCTGAACGCCTGTACGGACG
CGATGCTCGGCGCCGCTTCGGCAGCGCCTGCACGAGACGCTTTCCTCGCAGCGGTCGACGAGGCGAAGATTAAAACCCTG
CGTTGA

Upstream 100 bases:

>100_bases
TGGTTCATTCTGCCTCCCTCCCCTTGCAAGTATCGGTAGTTGCTCTGGAACGATTGAGAGGGAAGTCGGTTAGGCCGCCA
GAAACAGCAGGTATGTGGAC

Downstream 100 bases:

>100_bases
CATCACGCGGGTACCCTCCCCTTGCAAAGAGCAATGACGGAATCGAGCATGGCGTTGTCGCGAAGCTTGTTTTCGGTTTC
GGTCTCAGGACGCGGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MAENWDECVIIDLPNLEGVQIVWSPAYAAQLLSENWPDTKGRSYSAALNACTDAMLGAASAAPARDAFLAAVDEAKIKTL
R

Sequences:

>Translated_81_residues
MAENWDECVIIDLPNLEGVQIVWSPAYAAQLLSENWPDTKGRSYSAALNACTDAMLGAASAAPARDAFLAAVDEAKIKTL
R
>Mature_80_residues
AENWDECVIIDLPNLEGVQIVWSPAYAAQLLSENWPDTKGRSYSAALNACTDAMLGAASAAPARDAFLAAVDEAKIKTLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8682; Mature: 8551

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENWDECVIIDLPNLEGVQIVWSPAYAAQLLSENWPDTKGRSYSAALNACTDAMLGAAS
CCCCCCCEEEEECCCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
AAPARDAFLAAVDEAKIKTLR
CCCCCHHHHHHHCCCHHEECC
>Mature Secondary Structure 
AENWDECVIIDLPNLEGVQIVWSPAYAAQLLSENWPDTKGRSYSAALNACTDAMLGAAS
CCCCCCEEEEECCCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
AAPARDAFLAAVDEAKIKTLR
CCCCCHHHHHHHCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA