Click here to switch to the map view.

The map label for this gene is 150397109

Identifier: 150397109

GI number: 150397109

Start: 1970537

End: 1971289

Strand: Reverse

Name: 150397109

Synonym: Smed_1907

Alternate gene names: NA

Gene position: 1971289-1970537 (Counterclockwise)

Preceding gene: 150397110

Following gene: 150397108

Centisome position: 52.12

GC content: 63.35

Gene sequence:

>753_bases
ATGAGCATCAGTGCCGCCATCCGCCGCATGTTGGAAGCTGGTCTCACGATCGAGCAAGCCCTCGTGGCCGCCGAGGCTTT
CGAAGCCGAGGCTGAAACTGTTCCGGCCGTCGATCGTGCTGCAGTGAAGAGACGCGCGTGGGATCGCGAACGGAAGCGTA
AACAGCGGAATTCCGCCTTGTCCGGTGGAAGTCCGGTGGAAACAGGTGGACAGCAGGTGGACTCCGAGACCCTTTCCTCC
CCGGAGGTTTCCCCCCACACCCCCCTTCCTAACCCCTCCAATCCTATACCCCCTTCGCCCCCCAAGGGGGGCTCTTCCCC
CACGGCGGTCGACCAGGTCGTGACGGCATTTTCGGAAATGGCGCGCCAGTCCGGGCTTTCCGTGCCGAGGGCCGTCACGG
CCTCTCGCCGTCGCTCGTTGCTGCTGCGGATCGAGGAACACGGCCTGCCGGCGGTTCTCGATGCCATCGAGCGCATCGGC
CGCAGCCGGTTCTGCCGTGGCGAAAACGACCGCGGCTGGCGCGCTGACCTCGATTTCCTCTGCCAGCCTAAGAGCTTCGT
CTCGATCCTCGAAGGCAAATACGACGACCGGCCGCAGCAATCGCAAGCACCGCCTCGTGAAAGCGAACACGCCCGCCATC
AGCGGGAATGCCGAGAAGCCATCCAACGGAAACTGAACGGAAATGGACATGACGAATTTGCCAGCACCGGCCCAGCTTTC
GACCTTGAACCGGGAGATTTCCGCGCTCACTGA

Upstream 100 bases:

>100_bases
ACCGCATCGTCGACGTCAAGGGCGTTGCCACCAAGGACTTTAACATCAAACGCAAGCTCATGCGGGCCATCTACGGAATC
GATGTGGAGGTCATCCGCTG

Downstream 100 bases:

>100_bases
GCGGCTATCACCGGTCCGCGAGGAAGCAGTTTTGCGCAGCCTCGAAGTTATGCAGGCAGCCGGGATGAGCATTCCCTCCG
GTATTGACCCGAACAAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSISAAIRRMLEAGLTIEQALVAAEAFEAEAETVPAVDRAAVKRRAWDRERKRKQRNSALSGGSPVETGGQQVDSETLSS
PEVSPHTPLPNPSNPIPPSPPKGGSSPTAVDQVVTAFSEMARQSGLSVPRAVTASRRRSLLLRIEEHGLPAVLDAIERIG
RSRFCRGENDRGWRADLDFLCQPKSFVSILEGKYDDRPQQSQAPPRESEHARHQRECREAIQRKLNGNGHDEFASTGPAF
DLEPGDFRAH

Sequences:

>Translated_250_residues
MSISAAIRRMLEAGLTIEQALVAAEAFEAEAETVPAVDRAAVKRRAWDRERKRKQRNSALSGGSPVETGGQQVDSETLSS
PEVSPHTPLPNPSNPIPPSPPKGGSSPTAVDQVVTAFSEMARQSGLSVPRAVTASRRRSLLLRIEEHGLPAVLDAIERIG
RSRFCRGENDRGWRADLDFLCQPKSFVSILEGKYDDRPQQSQAPPRESEHARHQRECREAIQRKLNGNGHDEFASTGPAF
DLEPGDFRAH
>Mature_249_residues
SISAAIRRMLEAGLTIEQALVAAEAFEAEAETVPAVDRAAVKRRAWDRERKRKQRNSALSGGSPVETGGQQVDSETLSSP
EVSPHTPLPNPSNPIPPSPPKGGSSPTAVDQVVTAFSEMARQSGLSVPRAVTASRRRSLLLRIEEHGLPAVLDAIERIGR
SRFCRGENDRGWRADLDFLCQPKSFVSILEGKYDDRPQQSQAPPRESEHARHQRECREAIQRKLNGNGHDEFASTGPAFD
LEPGDFRAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27416; Mature: 27285

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISAAIRRMLEAGLTIEQALVAAEAFEAEAETVPAVDRAAVKRRAWDRERKRKQRNSAL
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
SGGSPVETGGQQVDSETLSSPEVSPHTPLPNPSNPIPPSPPKGGSSPTAVDQVVTAFSEM
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ARQSGLSVPRAVTASRRRSLLLRIEEHGLPAVLDAIERIGRSRFCRGENDRGWRADLDFL
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
CQPKSFVSILEGKYDDRPQQSQAPPRESEHARHQRECREAIQRKLNGNGHDEFASTGPAF
CCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCC
DLEPGDFRAH
CCCCCCCCCC
>Mature Secondary Structure 
SISAAIRRMLEAGLTIEQALVAAEAFEAEAETVPAVDRAAVKRRAWDRERKRKQRNSAL
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
SGGSPVETGGQQVDSETLSSPEVSPHTPLPNPSNPIPPSPPKGGSSPTAVDQVVTAFSEM
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ARQSGLSVPRAVTASRRRSLLLRIEEHGLPAVLDAIERIGRSRFCRGENDRGWRADLDFL
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
CQPKSFVSILEGKYDDRPQQSQAPPRESEHARHQRECREAIQRKLNGNGHDEFASTGPAF
CCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCC
DLEPGDFRAH
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA