| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397095
Identifier: 150397095
GI number: 150397095
Start: 1959552
End: 1959989
Strand: Reverse
Name: 150397095
Synonym: Smed_1893
Alternate gene names: NA
Gene position: 1959989-1959552 (Counterclockwise)
Preceding gene: 150397096
Following gene: 150397094
Centisome position: 51.83
GC content: 61.42
Gene sequence:
>438_bases ATGCCTGCAATTCAGACCACTTATAGCGCCACGCACGCCCGCTGGATCGAGGGCATGAACCTCAACATGGAGCCTTCAGT CGTCGTCACGCGCCTCGCTGAGGACGTCGAGGGCATCGGCTTCGGCAAGGTTTGCGTTCAGGGCACCGCCGACAACCAGG TTGTCGACTCCGAAGCAACCGCCAAGTTCGCCGGCATTGCCGTTCTCGACACTACGCGACCAAGCGGCAAGTACGACCAG TACGACAACGTCGCCGTCATGAAGAAGGGCGTCATCGTCGTACAGGCCTCCGTCGCGGTCGCTGTCGGCGATGCCGTCTA TTACATCCCCGCGACCGGCGTTCTCACCAACGTCTCGACGGGTAACACCCTCATCCCGAATGCTCAGTGGGATACCAGCA CCGCAGGTGCCGGTCTCGCTGCTCTTCGACTCGGCTAA
Upstream 100 bases:
>100_bases AGGGTCTCACGCAGACTTCTGACGCCAGCACCTCCGCAACCGCTCACAAGTCCATGGTCTCCGAACTCGAATCGGCCTGG CAGACGAAGGGAGCTAAGTG
Downstream 100 bases:
>100_bases CAGGAGCGATCTCGATGAACGCAATTATCACTCATGACGCTCAGCAGGTCGCGATGAGCTTCCTTATCCGTCAGGCCTCG CTGATCGAGCCGACGGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPAIQTTYSATHARWIEGMNLNMEPSVVVTRLAEDVEGIGFGKVCVQGTADNQVVDSEATAKFAGIAVLDTTRPSGKYDQ YDNVAVMKKGVIVVQASVAVAVGDAVYYIPATGVLTNVSTGNTLIPNAQWDTSTAGAGLAALRLG
Sequences:
>Translated_145_residues MPAIQTTYSATHARWIEGMNLNMEPSVVVTRLAEDVEGIGFGKVCVQGTADNQVVDSEATAKFAGIAVLDTTRPSGKYDQ YDNVAVMKKGVIVVQASVAVAVGDAVYYIPATGVLTNVSTGNTLIPNAQWDTSTAGAGLAALRLG >Mature_144_residues PAIQTTYSATHARWIEGMNLNMEPSVVVTRLAEDVEGIGFGKVCVQGTADNQVVDSEATAKFAGIAVLDTTRPSGKYDQY DNVAVMKKGVIVVQASVAVAVGDAVYYIPATGVLTNVSTGNTLIPNAQWDTSTAGAGLAALRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15076; Mature: 14945
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIQTTYSATHARWIEGMNLNMEPSVVVTRLAEDVEGIGFGKVCVQGTADNQVVDSEAT CCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCC AKFAGIAVLDTTRPSGKYDQYDNVAVMKKGVIVVQASVAVAVGDAVYYIPATGVLTNVST CEEEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEEEEECCEEEEEECCCEEEECCC GNTLIPNAQWDTSTAGAGLAALRLG CCEECCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure PAIQTTYSATHARWIEGMNLNMEPSVVVTRLAEDVEGIGFGKVCVQGTADNQVVDSEAT CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCC AKFAGIAVLDTTRPSGKYDQYDNVAVMKKGVIVVQASVAVAVGDAVYYIPATGVLTNVST CEEEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEEEEECCEEEEEECCCEEEECCC GNTLIPNAQWDTSTAGAGLAALRLG CCEECCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA