| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397086
Identifier: 150397086
GI number: 150397086
Start: 1954071
End: 1954556
Strand: Reverse
Name: 150397086
Synonym: Smed_1884
Alternate gene names: NA
Gene position: 1954556-1954071 (Counterclockwise)
Preceding gene: 150397087
Following gene: 150397085
Centisome position: 51.68
GC content: 57.61
Gene sequence:
>486_bases ATGGCAAACAAGGCAACGAAGAAGGGCAGCAAGGTTTATGTCTGCGCCACTGCCCAGAATACCGATCTAATCGAGTCCGC CTATGCAGCGCTAACCTGGGTGCAGGTTGGCAAGGTCGGCAATATCGGTGATTTCGGCGCCGAGTCGACGATGAACAGCT ACAACACGCTCGATGAGCCGGTTACCCAGAAACAGAAGGGCACCGCGAATGCCGGTGATCCACAGATCGAGGTCGCCTCA GTGCATGACGATGCAGGCCAGGTCATCCTGCGAACCTTCGGCAATCCTCTGAACCTCGACAACATGGCAATAAAGGTCGA GCGCAACGATGGCGGCGAGGGGTTCACGAACACGATCTTCTATAGCCGTGGCGTCGTGTCTGGCCCGCTTTATCCGGGTG GCGGCTCCGACGACTTCGAGCTCGAGCGCTTCACGATCGGCCTCAACCAACTGCCGATCCGCGTTAATCCCACTGCAATC CCGTAA
Upstream 100 bases:
>100_bases ATCAGCAGCGAGCCATGGGCGGCAGGCCCGCTCCAAGAGGGTGAACGGGTGCAGATCCCCGTCACCATTCCATACATCGC CTTCGAACCGGAGAACTGAC
Downstream 100 bases:
>100_bases TCGATAGGTGACCCTTGGACATTTCCAAACTCGTCAATTCTGAAGACCTTTTCGAGCTCAACCTCGCGGGACCGGATACC GATGAACTCGTGGGTATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MANKATKKGSKVYVCATAQNTDLIESAYAALTWVQVGKVGNIGDFGAESTMNSYNTLDEPVTQKQKGTANAGDPQIEVAS VHDDAGQVILRTFGNPLNLDNMAIKVERNDGGEGFTNTIFYSRGVVSGPLYPGGGSDDFELERFTIGLNQLPIRVNPTAI P
Sequences:
>Translated_161_residues MANKATKKGSKVYVCATAQNTDLIESAYAALTWVQVGKVGNIGDFGAESTMNSYNTLDEPVTQKQKGTANAGDPQIEVAS VHDDAGQVILRTFGNPLNLDNMAIKVERNDGGEGFTNTIFYSRGVVSGPLYPGGGSDDFELERFTIGLNQLPIRVNPTAI P >Mature_160_residues ANKATKKGSKVYVCATAQNTDLIESAYAALTWVQVGKVGNIGDFGAESTMNSYNTLDEPVTQKQKGTANAGDPQIEVASV HDDAGQVILRTFGNPLNLDNMAIKVERNDGGEGFTNTIFYSRGVVSGPLYPGGGSDDFELERFTIGLNQLPIRVNPTAIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17156; Mature: 17025
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKATKKGSKVYVCATAQNTDLIESAYAALTWVQVGKVGNIGDFGAESTMNSYNTLDEP CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCC VTQKQKGTANAGDPQIEVASVHDDAGQVILRTFGNPLNLDNMAIKVERNDGGEGFTNTIF HHHHHCCCCCCCCCEEEEEEECCCCHHEEHECCCCCCCCCCEEEEEECCCCCCCCCEEEE YSRGVVSGPLYPGGGSDDFELERFTIGLNQLPIRVNPTAIP EECCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCC >Mature Secondary Structure ANKATKKGSKVYVCATAQNTDLIESAYAALTWVQVGKVGNIGDFGAESTMNSYNTLDEP CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCC VTQKQKGTANAGDPQIEVASVHDDAGQVILRTFGNPLNLDNMAIKVERNDGGEGFTNTIF HHHHHCCCCCCCCCEEEEEEECCCCHHEEHECCCCCCCCCCEEEEEECCCCCCCCCEEEE YSRGVVSGPLYPGGGSDDFELERFTIGLNQLPIRVNPTAIP EECCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA