Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397076

Identifier: 150397076

GI number: 150397076

Start: 1945435

End: 1948092

Strand: Reverse

Name: 150397076

Synonym: Smed_1874

Alternate gene names: NA

Gene position: 1948092-1945435 (Counterclockwise)

Preceding gene: 150397077

Following gene: 150397075

Centisome position: 51.51

GC content: 63.09

Gene sequence:

>2658_bases
ATGGCAATCTTTACAGGAATCGCCACGGCGATCGCCGGCGCGCTGTTCGGCGGCTCTACGCTTGCCACCAGCCTGATCGG
CGGCGCGCTCGCCTTCGGCGCGAAGTTTGCCGTGGGCAAGCTCACCCAGCAGAGACAGGGCAAGCAGAAGCACACGGCCG
TCCAGGGCGAGATCCAGTTCGGCGGCGACGTGCCGGTCGGCACTCTCTACGGCGTCGGCAAGACCAAGGGCCAGCGCGCC
TTCTATGCCAAGTGGGACAAGGGCAACAAGCGCAATGCCGAAGTCTTCATCCTCGCCAACGGCTGGTGCGACGGGCTGGA
GCCGTACGTCTATATTTATGGCGAGAAATACAATCTCGTGGCGCAGGCGACGATCGGCAACGAGGTCGCGCGTTACGGCG
TCCAGGGCTTCATCGACGGCGACGGCAACAGCGCGATCTCGATCCGCTTCTATGACGGCCGCCCGGGACAGGGCGTCGAT
CAGCGCCTCGTCGATGTGACGGCCAACCTCGGCAATAAGTGGAAGGCGACCAGCAAGCTTTCGGGCATGTGCTATGTCGT
CGTCGAGCGCTACTATCACCTCGAATTCTTCCGTGACGCCGGCAAGGGCAAGCCGGACATCGATTTCGTGCTGCGCGGGC
TTCGCGAATACGACCCGCGTAAGGACTCGACGGTTGCCGGTGGCTCCGGGACGCAGCGGCTCACCATGCCCTCGACCTGG
GTGCACACGAAAAACCCGGCCTTGCACCGGCTGAACTACCAGCTGGGCCTTCGCGCGCTGGTCTCTGGCCGCACGCTGAT
CGGCGAGGGCAAGAGCCTCGGCCAGATCGATCTCGCCACCTATTTCGTGGCGATGAACGTCTGCGACACTCTGCGCAGCA
ACGGCAAGAAGACCTATGAGTGCTCTGTCTTCGTCAGTGGCGACGATGATCACACCGAGGTGCTGAAGCAGTTTGATGAC
GCGATGGCCGGCTATGGGCTTAACCGCCGCGGCCTTTCCGGCGTCATTCCCGGTGCACCGCAGATCCCGGTCAAGGACCT
GACTGCAGCCGACATCCCGATCGACCGCGCCAAGGACGTGCAGTTCCGGCCTTCGGCTTTCGAGCGCTTCAACCACCTTT
CCGGCCAGTTCACCTCGATCGAGTCGATGTGGAACCCGGAGAGCCTGAAGCCGGTCTATGTGAATGCGGACATCGCCGCC
GACGGCCGTAACCGGCAGACGAGCATCGATTTCCTGCAGGTGACCGATCCGGACATCGCGCAATATCTGCTCAATATCCG
CTATCGGCAGAACCGCATGGGCGGCAAGGCGACGGTTCCCGTCAGCCGTCGCTTTGGTCTGGCGGTACAGGAAGGCGAGT
GGATCACCTGGCGTGGCAAGACCTGGCTGATCAGTGAATGGCGGGCGGACGAGCGGCTGCGCATCACGCTGGTGCTTTCG
GAGACCAGTGCGGCGATCTATGACGACGACGGCATCGAGCCCGGCCCAATCGTCGTGCCGCCGACGCCGCCGATCAATCC
GTCGCTGCTCTCGACCGTGCAGAACTTCAATGTTGCCGTCGGCATGATCAACGGCGCGCAGGGCTATGATACGCCGGCGC
TCGTCTTCACCTGGACGCCGCCGGATGATCCGACAATCACCGCCGTGCGTTTCGTCTACCAGATCGAGGGCACGACAGAG
ATCTTCGAGGATCAGTGCACCTCGCCCGAGGACGGCAGCTTCCGCACCACGAAGAACGTCGTTTCCGGCAAAGTCTATAA
CGCCCGGGCGACGATCACGACCGTGCCCGACCGGCTGCGCACCTTCACGCCCTGGATGACGACGGCGCAGCCGACCGGCT
TGCAGACGCTGCTGACCGGCTTGCAACAGCTGCAGGACGATGCGCTGAACCGCTTCAAGGAACTGCAGCAGGAGATGGAC
GAATTCTTCCGGCCGCGCCTGGTCGAGCTGCTGGATGCTTTCTCGCTTGAGGGTGCTGTCGGACAGATCGAGCGCCAGCA
GATCGTTGCCACCATAGGTGACGCGCTGGCGCAGATCACCGAGGAGCGCCGGGTTCGCGTTTCCGAGAACGAGGCGATGG
CGCAGTTGCTCACCTACCTGCAGGCGAGCCTCGGCGGCACAAGTGCGCGGCTGATCACCGAGGAGACCGTGCGCGCAACG
ACGGACAGCGCCCTCGCAAGCTCGATCACAACACTCGACGCTGAAGTCGATGGCAACCTCGCCCGCCTGATCGCCGAGGA
GACCGCTCGCGCAGACGGCGACGGCGCGCTTGCGACCAGCATCAGCGGCGTGAGCGCTGATTTCAACGGCCGGTTCGCAC
AAGGGCTGGTGAAGTTCGAGGCGGTCGCGGCGCCGACCGGCGTTGATGCCCGTTTCTCGGTGTTGCTGCGGACCGGGACC
AACCAGAGCTTCAAGGTGTCGGGTTTCTATGTCGAGCTTTACACCGAAGGCGGTGTGCAGAAGTCGCGCATGGCCGTGCA
GGCGGATCAGTTCCTCGTCACGTCAGGCAACAGCCGCCACTACCCACTCGTCTTCGAAGACGGAGAGTTGAAGCTGGCCG
TTGCCAACATCGGCACGGTCAATGCCGGTCTTCTTCAGTCGCTGAACGGCAAAATGAAAATCGACCTCAACAACGGCACG
ATCGAGATCTTCAGCTGA

Upstream 100 bases:

>100_bases
CGTCTGCCTCGGCGCCCGTTTCGTCACCAAGACCGAACGCGGCCGCAGCGATAAAGGCCTCGCCGACACCATTGCCGCCT
TTCATCTCGGATAATTCATC

Downstream 100 bases:

>100_bases
TGACCAGGACAATGATTGGCGTCGACTCGACCGGCGCCGGCTGCATCAAGATCATGAAGAATGACGCCGACAATCCGCGC
ACGACGCCGGACAGCCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 885; Mature: 884

Protein sequence:

>885_residues
MAIFTGIATAIAGALFGGSTLATSLIGGALAFGAKFAVGKLTQQRQGKQKHTAVQGEIQFGGDVPVGTLYGVGKTKGQRA
FYAKWDKGNKRNAEVFILANGWCDGLEPYVYIYGEKYNLVAQATIGNEVARYGVQGFIDGDGNSAISIRFYDGRPGQGVD
QRLVDVTANLGNKWKATSKLSGMCYVVVERYYHLEFFRDAGKGKPDIDFVLRGLREYDPRKDSTVAGGSGTQRLTMPSTW
VHTKNPALHRLNYQLGLRALVSGRTLIGEGKSLGQIDLATYFVAMNVCDTLRSNGKKTYECSVFVSGDDDHTEVLKQFDD
AMAGYGLNRRGLSGVIPGAPQIPVKDLTAADIPIDRAKDVQFRPSAFERFNHLSGQFTSIESMWNPESLKPVYVNADIAA
DGRNRQTSIDFLQVTDPDIAQYLLNIRYRQNRMGGKATVPVSRRFGLAVQEGEWITWRGKTWLISEWRADERLRITLVLS
ETSAAIYDDDGIEPGPIVVPPTPPINPSLLSTVQNFNVAVGMINGAQGYDTPALVFTWTPPDDPTITAVRFVYQIEGTTE
IFEDQCTSPEDGSFRTTKNVVSGKVYNARATITTVPDRLRTFTPWMTTAQPTGLQTLLTGLQQLQDDALNRFKELQQEMD
EFFRPRLVELLDAFSLEGAVGQIERQQIVATIGDALAQITEERRVRVSENEAMAQLLTYLQASLGGTSARLITEETVRAT
TDSALASSITTLDAEVDGNLARLIAEETARADGDGALATSISGVSADFNGRFAQGLVKFEAVAAPTGVDARFSVLLRTGT
NQSFKVSGFYVELYTEGGVQKSRMAVQADQFLVTSGNSRHYPLVFEDGELKLAVANIGTVNAGLLQSLNGKMKIDLNNGT
IEIFS

Sequences:

>Translated_885_residues
MAIFTGIATAIAGALFGGSTLATSLIGGALAFGAKFAVGKLTQQRQGKQKHTAVQGEIQFGGDVPVGTLYGVGKTKGQRA
FYAKWDKGNKRNAEVFILANGWCDGLEPYVYIYGEKYNLVAQATIGNEVARYGVQGFIDGDGNSAISIRFYDGRPGQGVD
QRLVDVTANLGNKWKATSKLSGMCYVVVERYYHLEFFRDAGKGKPDIDFVLRGLREYDPRKDSTVAGGSGTQRLTMPSTW
VHTKNPALHRLNYQLGLRALVSGRTLIGEGKSLGQIDLATYFVAMNVCDTLRSNGKKTYECSVFVSGDDDHTEVLKQFDD
AMAGYGLNRRGLSGVIPGAPQIPVKDLTAADIPIDRAKDVQFRPSAFERFNHLSGQFTSIESMWNPESLKPVYVNADIAA
DGRNRQTSIDFLQVTDPDIAQYLLNIRYRQNRMGGKATVPVSRRFGLAVQEGEWITWRGKTWLISEWRADERLRITLVLS
ETSAAIYDDDGIEPGPIVVPPTPPINPSLLSTVQNFNVAVGMINGAQGYDTPALVFTWTPPDDPTITAVRFVYQIEGTTE
IFEDQCTSPEDGSFRTTKNVVSGKVYNARATITTVPDRLRTFTPWMTTAQPTGLQTLLTGLQQLQDDALNRFKELQQEMD
EFFRPRLVELLDAFSLEGAVGQIERQQIVATIGDALAQITEERRVRVSENEAMAQLLTYLQASLGGTSARLITEETVRAT
TDSALASSITTLDAEVDGNLARLIAEETARADGDGALATSISGVSADFNGRFAQGLVKFEAVAAPTGVDARFSVLLRTGT
NQSFKVSGFYVELYTEGGVQKSRMAVQADQFLVTSGNSRHYPLVFEDGELKLAVANIGTVNAGLLQSLNGKMKIDLNNGT
IEIFS
>Mature_884_residues
AIFTGIATAIAGALFGGSTLATSLIGGALAFGAKFAVGKLTQQRQGKQKHTAVQGEIQFGGDVPVGTLYGVGKTKGQRAF
YAKWDKGNKRNAEVFILANGWCDGLEPYVYIYGEKYNLVAQATIGNEVARYGVQGFIDGDGNSAISIRFYDGRPGQGVDQ
RLVDVTANLGNKWKATSKLSGMCYVVVERYYHLEFFRDAGKGKPDIDFVLRGLREYDPRKDSTVAGGSGTQRLTMPSTWV
HTKNPALHRLNYQLGLRALVSGRTLIGEGKSLGQIDLATYFVAMNVCDTLRSNGKKTYECSVFVSGDDDHTEVLKQFDDA
MAGYGLNRRGLSGVIPGAPQIPVKDLTAADIPIDRAKDVQFRPSAFERFNHLSGQFTSIESMWNPESLKPVYVNADIAAD
GRNRQTSIDFLQVTDPDIAQYLLNIRYRQNRMGGKATVPVSRRFGLAVQEGEWITWRGKTWLISEWRADERLRITLVLSE
TSAAIYDDDGIEPGPIVVPPTPPINPSLLSTVQNFNVAVGMINGAQGYDTPALVFTWTPPDDPTITAVRFVYQIEGTTEI
FEDQCTSPEDGSFRTTKNVVSGKVYNARATITTVPDRLRTFTPWMTTAQPTGLQTLLTGLQQLQDDALNRFKELQQEMDE
FFRPRLVELLDAFSLEGAVGQIERQQIVATIGDALAQITEERRVRVSENEAMAQLLTYLQASLGGTSARLITEETVRATT
DSALASSITTLDAEVDGNLARLIAEETARADGDGALATSISGVSADFNGRFAQGLVKFEAVAAPTGVDARFSVLLRTGTN
QSFKVSGFYVELYTEGGVQKSRMAVQADQFLVTSGNSRHYPLVFEDGELKLAVANIGTVNAGLLQSLNGKMKIDLNNGTI
EIFS

Specific function: Unknown

COG id: COG4733

COG function: function code S; Phage-related protein, tail component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96543; Mature: 96412

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFTGIATAIAGALFGGSTLATSLIGGALAFGAKFAVGKLTQQRQGKQKHTAVQGEIQF
CEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHCEEEEEEEE
GGDVPVGTLYGVGKTKGQRAFYAKWDKGNKRNAEVFILANGWCDGLEPYVYIYGEKYNLV
CCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCEEEE
AQATIGNEVARYGVQGFIDGDGNSAISIRFYDGRPGQGVDQRLVDVTANLGNKWKATSKL
EEEHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEECCHHH
SGMCYVVVERYYHLEFFRDAGKGKPDIDFVLRGLREYDPRKDSTVAGGSGTQRLTMPSTW
CCEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCEEEECCCCE
VHTKNPALHRLNYQLGLRALVSGRTLIGEGKSLGQIDLATYFVAMNVCDTLRSNGKKTYE
EECCCCHHEEEEHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
CSVFVSGDDDHTEVLKQFDDAMAGYGLNRRGLSGVIPGAPQIPVKDLTAADIPIDRAKDV
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QFRPSAFERFNHLSGQFTSIESMWNPESLKPVYVNADIAADGRNRQTSIDFLQVTDPDIA
EECCHHHHHHHHCCCCEEEHHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCHHHH
QYLLNIRYRQNRMGGKATVPVSRRFGLAVQEGEWITWRGKTWLISEWRADERLRITLVLS
HHHHHHHHHHCCCCCEEECCCHHHCCEEEECCCEEEECCCEEEEECCCCCCEEEEEEEEE
ETSAAIYDDDGIEPGPIVVPPTPPINPSLLSTVQNFNVAVGMINGAQGYDTPALVFTWTP
CCCEEEECCCCCCCCCEEECCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEECC
PDDPTITAVRFVYQIEGTTEIFEDQCTSPEDGSFRTTKNVVSGKVYNARATITTVPDRLR
CCCCCEEEEEEEEEECCCHHHHHHCCCCCCCCCCEEHHHHHCCEEEECEEEEEECCHHHH
TFTPWMTTAQPTGLQTLLTGLQQLQDDALNRFKELQQEMDEFFRPRLVELLDAFSLEGAV
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
GQIERQQIVATIGDALAQITEERRVRVSENEAMAQLLTYLQASLGGTSARLITEETVRAT
HHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHC
TDSALASSITTLDAEVDGNLARLIAEETARADGDGALATSISGVSADFNGRFAQGLVKFE
HHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHH
AVAAPTGVDARFSVLLRTGTNQSFKVSGFYVELYTEGGVQKSRMAVQADQFLVTSGNSRH
EEECCCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCHHHEEEEECEEEEECCCCCC
YPLVFEDGELKLAVANIGTVNAGLLQSLNGKMKIDLNNGTIEIFS
CCEEEECCCEEEEEEECCCCCHHHHHHCCCEEEEEECCCEEEEEC
>Mature Secondary Structure 
AIFTGIATAIAGALFGGSTLATSLIGGALAFGAKFAVGKLTQQRQGKQKHTAVQGEIQF
EEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHCEEEEEEEE
GGDVPVGTLYGVGKTKGQRAFYAKWDKGNKRNAEVFILANGWCDGLEPYVYIYGEKYNLV
CCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCEEEE
AQATIGNEVARYGVQGFIDGDGNSAISIRFYDGRPGQGVDQRLVDVTANLGNKWKATSKL
EEEHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEECCHHH
SGMCYVVVERYYHLEFFRDAGKGKPDIDFVLRGLREYDPRKDSTVAGGSGTQRLTMPSTW
CCEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCEEEECCCCE
VHTKNPALHRLNYQLGLRALVSGRTLIGEGKSLGQIDLATYFVAMNVCDTLRSNGKKTYE
EECCCCHHEEEEHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
CSVFVSGDDDHTEVLKQFDDAMAGYGLNRRGLSGVIPGAPQIPVKDLTAADIPIDRAKDV
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QFRPSAFERFNHLSGQFTSIESMWNPESLKPVYVNADIAADGRNRQTSIDFLQVTDPDIA
EECCHHHHHHHHCCCCEEEHHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCHHHH
QYLLNIRYRQNRMGGKATVPVSRRFGLAVQEGEWITWRGKTWLISEWRADERLRITLVLS
HHHHHHHHHHCCCCCEEECCCHHHCCEEEECCCEEEECCCEEEEECCCCCCEEEEEEEEE
ETSAAIYDDDGIEPGPIVVPPTPPINPSLLSTVQNFNVAVGMINGAQGYDTPALVFTWTP
CCCEEEECCCCCCCCCEEECCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEECC
PDDPTITAVRFVYQIEGTTEIFEDQCTSPEDGSFRTTKNVVSGKVYNARATITTVPDRLR
CCCCCEEEEEEEEEECCCHHHHHHCCCCCCCCCCEEHHHHHCCEEEECEEEEEECCHHHH
TFTPWMTTAQPTGLQTLLTGLQQLQDDALNRFKELQQEMDEFFRPRLVELLDAFSLEGAV
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
GQIERQQIVATIGDALAQITEERRVRVSENEAMAQLLTYLQASLGGTSARLITEETVRAT
HHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHC
TDSALASSITTLDAEVDGNLARLIAEETARADGDGALATSISGVSADFNGRFAQGLVKFE
HHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHH
AVAAPTGVDARFSVLLRTGTNQSFKVSGFYVELYTEGGVQKSRMAVQADQFLVTSGNSRH
EEECCCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCHHHEEEEECEEEEECCCCCC
YPLVFEDGELKLAVANIGTVNAGLLQSLNGKMKIDLNNGTIEIFS
CCEEEECCCEEEEEEECCCCCHHHHHHCCCEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA