| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397059
Identifier: 150397059
GI number: 150397059
Start: 1929960
End: 1930238
Strand: Direct
Name: 150397059
Synonym: Smed_1856
Alternate gene names: NA
Gene position: 1929960-1930238 (Clockwise)
Preceding gene: 150397058
Following gene: 150397064
Centisome position: 51.03
GC content: 58.78
Gene sequence:
>279_bases ATGCGGGCTGAGACATACGCAATCGTCAATCTGGCGGCTCTGAACCTCATAGAAGCCGTCAGTGCCGCCTACTTCGTCAC AGAGAAGCAGGCCACCACCCGTCACGAGTTTCGCGCCCGCGAAATGTTGAAGAAAATTGCTCTGGCTCTCGATTACGACC TTACCGAAGCGGCAATCCAAGCCGACCGTCAGGAACTCTCAACCGGCATCGCGCCGCGGGCGACGGTCCCCGCCCTCAGG CTTGTATCTGCTGAGTTTGCTGAACGCAGCGGTGACTGA
Upstream 100 bases:
>100_bases TCAACCGCGAGCGCGAGTTTAGCGGCGGCGCCGATGCGCGGCAGACGCAACGACAGCTTGGCACTCATAATTCCCGCCAG CAGTTCGGAGGCGCCCTGTG
Downstream 100 bases:
>100_bases TGTGCCGCCCTCCGCCGCTTCAATCGTCGTCAGGCGGGCAAGGCCATTTCGCGGGAGTGGAAAGACCGGACGGCAGTTTG GTCGCGTCGTCGCCGCAGGT
Product: putative signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MRAETYAIVNLAALNLIEAVSAAYFVTEKQATTRHEFRAREMLKKIALALDYDLTEAAIQADRQELSTGIAPRATVPALR LVSAEFAERSGD
Sequences:
>Translated_92_residues MRAETYAIVNLAALNLIEAVSAAYFVTEKQATTRHEFRAREMLKKIALALDYDLTEAAIQADRQELSTGIAPRATVPALR LVSAEFAERSGD >Mature_92_residues MRAETYAIVNLAALNLIEAVSAAYFVTEKQATTRHEFRAREMLKKIALALDYDLTEAAIQADRQELSTGIAPRATVPALR LVSAEFAERSGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10126; Mature: 10126
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAETYAIVNLAALNLIEAVSAAYFVTEKQATTRHEFRAREMLKKIALALDYDLTEAAIQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ADRQELSTGIAPRATVPALRLVSAEFAERSGD HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRAETYAIVNLAALNLIEAVSAAYFVTEKQATTRHEFRAREMLKKIALALDYDLTEAAIQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ADRQELSTGIAPRATVPALRLVSAEFAERSGD HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA