Click here to switch to the map view.

The map label for this gene is 150397047

Identifier: 150397047

GI number: 150397047

Start: 1920524

End: 1920961

Strand: Direct

Name: 150397047

Synonym: Smed_1844

Alternate gene names: NA

Gene position: 1920524-1920961 (Clockwise)

Preceding gene: 150397045

Following gene: 150397051

Centisome position: 50.78

GC content: 59.59

Gene sequence:

>438_bases
ATGAATCAAATCTTCGCCACGATATTGCTGGCCGCCGCTTCGACCCTCCCCTCCATCGCGGCAGAAACCGGCGAGCCTCG
CTATTTTGTGAAGGCTTGGCTTGAGAAGGCCGACAGAAGCTTCGAACACACCACCGGCTGGTGCGATGAGAAAGACCGCT
GCTTCGTGCCGATTGCCGAACATATCATCGAGCTGCGTGACCTGACCAGTTCGAGCTACAGACTCAAATTCTGGTCCGAC
CCCTGGGAGGAGGAGCCCTGCTGCATCTCCCGCACCGGTTCCTCCGAACTGGATCTCTGGAGCGGGCACCCCCGCGTGGT
CCCTCTTTATTACACCCCTAAGGCAGGCGATCGAGGGGTGATCCCCTTCGGCAAGCTCATCATCGCGGTCGAGGACCTCG
ACGCACGAGATAAAGCGCCTGAAACGCCTCGCCTGTGA

Upstream 100 bases:

>100_bases
TGCTACCCCTAATTGCGCCAAAATCTCAGATCAGATTGCGGCCGTAATGGGCGGCACCGCCCGGATCTCGACGAGCCGCC
GTCACACCGCAGGGGGGAAC

Downstream 100 bases:

>100_bases
CTGGCTCAGTGAGGAGAACGGTGCGCAGTGATCAGGCAACCTGTCGCTTACTCTCTCCACCCGGAGACCGCTTGTTTGAG
GGTCATCCTGGGACCCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNQIFATILLAAASTLPSIAAETGEPRYFVKAWLEKADRSFEHTTGWCDEKDRCFVPIAEHIIELRDLTSSSYRLKFWSD
PWEEEPCCISRTGSSELDLWSGHPRVVPLYYTPKAGDRGVIPFGKLIIAVEDLDARDKAPETPRL

Sequences:

>Translated_145_residues
MNQIFATILLAAASTLPSIAAETGEPRYFVKAWLEKADRSFEHTTGWCDEKDRCFVPIAEHIIELRDLTSSSYRLKFWSD
PWEEEPCCISRTGSSELDLWSGHPRVVPLYYTPKAGDRGVIPFGKLIIAVEDLDARDKAPETPRL
>Mature_145_residues
MNQIFATILLAAASTLPSIAAETGEPRYFVKAWLEKADRSFEHTTGWCDEKDRCFVPIAEHIIELRDLTSSSYRLKFWSD
PWEEEPCCISRTGSSELDLWSGHPRVVPLYYTPKAGDRGVIPFGKLIIAVEDLDARDKAPETPRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16428; Mature: 16428

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIFATILLAAASTLPSIAAETGEPRYFVKAWLEKADRSFEHTTGWCDEKDRCFVPIAE
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHH
HIIELRDLTSSSYRLKFWSDPWEEEPCCISRTGSSELDLWSGHPRVVPLYYTPKAGDRGV
HHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCCCCCC
IPFGKLIIAVEDLDARDKAPETPRL
CCCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNQIFATILLAAASTLPSIAAETGEPRYFVKAWLEKADRSFEHTTGWCDEKDRCFVPIAE
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHH
HIIELRDLTSSSYRLKFWSDPWEEEPCCISRTGSSELDLWSGHPRVVPLYYTPKAGDRGV
HHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCCCCCC
IPFGKLIIAVEDLDARDKAPETPRL
CCCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA