Click here to switch to the map view.

The map label for this gene is 150397040

Identifier: 150397040

GI number: 150397040

Start: 1914448

End: 1915077

Strand: Reverse

Name: 150397040

Synonym: Smed_1837

Alternate gene names: NA

Gene position: 1915077-1914448 (Counterclockwise)

Preceding gene: 150397041

Following gene: 150397039

Centisome position: 50.64

GC content: 54.92

Gene sequence:

>630_bases
GTGAGAAGGCAAATTCGTGGATTGCAGGATGTTTATAATGAAATTCCAAAGACGACATTCGCGTTGGAACTGCGCGATTT
CAGCGAGGCGGCGAACAGCTTCTCGCCGAACGTGGCGAGCCCGCGCCCGCCGGATGGCAAGGGCACGGAGGTGGCCGCGA
CATATGTAGTGAGCAATACGAATCCGACGGGCTGGTTCGGTAACGAAATGCATAGCGGCCTTTTCATTATCCCGGACGAC
GGCGATCGGGAGGGAAAGTTCCTCTATGATCCTTCCGGCACTTATATGAACCGGGAAATGGGAAGCGGGCGCGCCCTCTA
CGGGCCCGATGTGTCACCCGAGGAATACCTCAAATATCAACTGCTGGATGGTCCAAATGTGACGATACGCAAATATGCAA
CAACGCCCGAAGAGGAGGCTGAAATAATCAAGCGGTCCGATGATATCGGCGGCGGCGGATTCTTTGACTGCACAACCAAC
GTAACGCGGGCAATAAACGGGGTCGGTCCCTTTGCCGAAATACAAGAAACGATGTGGCCGACCAAACTTGACCGGCAACT
TCGACAGTCGAAGCGCGCGGTCGGGGAAGCGTATGACCTGGAGAGCCTCAAGCAACTCCTTTCCAAATGA

Upstream 100 bases:

>100_bases
ACCAGATCGACGCCGAACTGAACCTGAAACGACAGCAGAACGCCGTGGAAATCATGGGCGGCGAGCCGCTTGCAGCGGCA
CATATAGGAGGGTTGCCGGG

Downstream 100 bases:

>100_bases
GAGGCTTTGGGGATCAAACCAACGGCGAACGGCATGGCGGTTGCGCGTTGCAGCTACGGTGCAGTTTGCCGAGGACCGAG
ATCTGGTGAATGCAGACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRRQIRGLQDVYNEIPKTTFALELRDFSEAANSFSPNVASPRPPDGKGTEVAATYVVSNTNPTGWFGNEMHSGLFIIPDD
GDREGKFLYDPSGTYMNREMGSGRALYGPDVSPEEYLKYQLLDGPNVTIRKYATTPEEEAEIIKRSDDIGGGGFFDCTTN
VTRAINGVGPFAEIQETMWPTKLDRQLRQSKRAVGEAYDLESLKQLLSK

Sequences:

>Translated_209_residues
MRRQIRGLQDVYNEIPKTTFALELRDFSEAANSFSPNVASPRPPDGKGTEVAATYVVSNTNPTGWFGNEMHSGLFIIPDD
GDREGKFLYDPSGTYMNREMGSGRALYGPDVSPEEYLKYQLLDGPNVTIRKYATTPEEEAEIIKRSDDIGGGGFFDCTTN
VTRAINGVGPFAEIQETMWPTKLDRQLRQSKRAVGEAYDLESLKQLLSK
>Mature_209_residues
MRRQIRGLQDVYNEIPKTTFALELRDFSEAANSFSPNVASPRPPDGKGTEVAATYVVSNTNPTGWFGNEMHSGLFIIPDD
GDREGKFLYDPSGTYMNREMGSGRALYGPDVSPEEYLKYQLLDGPNVTIRKYATTPEEEAEIIKRSDDIGGGGFFDCTTN
VTRAINGVGPFAEIQETMWPTKLDRQLRQSKRAVGEAYDLESLKQLLSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23286; Mature: 23286

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQIRGLQDVYNEIPKTTFALELRDFSEAANSFSPNVASPRPPDGKGTEVAATYVVSNT
CCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECC
NPTGWFGNEMHSGLFIIPDDGDREGKFLYDPSGTYMNREMGSGRALYGPDVSPEEYLKYQ
CCCCCCCHHHCCCEEEECCCCCCCCCEEECCCCCEECCCCCCCCEEECCCCCHHHHHEEE
LLDGPNVTIRKYATTPEEEAEIIKRSDDIGGGGFFDCTTNVTRAINGVGPFAEIQETMWP
ECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHCCCCHHHHHHHHCH
TKLDRQLRQSKRAVGEAYDLESLKQLLSK
HHHHHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRRQIRGLQDVYNEIPKTTFALELRDFSEAANSFSPNVASPRPPDGKGTEVAATYVVSNT
CCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECC
NPTGWFGNEMHSGLFIIPDDGDREGKFLYDPSGTYMNREMGSGRALYGPDVSPEEYLKYQ
CCCCCCCHHHCCCEEEECCCCCCCCCEEECCCCCEECCCCCCCCEEECCCCCHHHHHEEE
LLDGPNVTIRKYATTPEEEAEIIKRSDDIGGGGFFDCTTNVTRAINGVGPFAEIQETMWP
ECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHCCCCHHHHHHHHCH
TKLDRQLRQSKRAVGEAYDLESLKQLLSK
HHHHHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA