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The map label for this gene is 150397038

Identifier: 150397038

GI number: 150397038

Start: 1912911

End: 1913603

Strand: Reverse

Name: 150397038

Synonym: Smed_1835

Alternate gene names: NA

Gene position: 1913603-1912911 (Counterclockwise)

Preceding gene: 150397039

Following gene: 150397037

Centisome position: 50.6

GC content: 60.03

Gene sequence:

>693_bases
ATGAGCGAATATTTACGCAACCAAATAGTCCAGAAAATGTTGGGCGAGCCGAAACAATCGCCGGCCCGAATGCCGCCAGC
AAGGCAGGCGGCGGACACCCAGCCATCGAGCGGGAGCGGCCCTTTGGGTGCGGCGGAGGTTGACGCCGCAAACGCGCTCG
GAGCCGCATATTACCAGTATCCGGGCTATTTCAAGAAGGGACAGGGGGGGCTCGCCGGATACCAACGGGAAAAACTGGCG
GCGGAATTTGGATGGTCTCCCGCAGGCATGGGCAAATACGAGGCCGCATTGCGCGCCGGACCGTTGAACGGCCTTGCGGC
ATGGGGGGATTCTCGAACCGCCAGCGCCGTGGCGCCTGAGTTGAATGTGCCCGAATGCGCTCCGGGCAACGGTTATGCCC
GCGCCAACAAGCGTCCGCATAACGATTGCCGCGATGCCTTCCGGCACGCTTACTGGAGCGCCTTGATGGCCCAACGCGAC
GAGGAGGACGCCGCCATGCTGGGTGACGCCTATGAACGGTCTTCTAAAGGGCCGTATGCCGAAGTCTACATGGACCTTTA
CAACAACAGGGTCGGACGACGGATCGGCTCGGCCAATAAAGATGCAAGCGGCGAGCAGATCTTCGACCTAGTCGCCGATG
AGCTGGAAAAACGCCGGCTAATTACAAGTCCATTTCAGGCACTAAAACGATGA

Upstream 100 bases:

>100_bases
GCACAGCGACCCATAGTCGCCCATAGTTGAACGCAGAGCAGTGTCGCCGAGCTTTTGCCCGGTGGCACCCCGTGTCCGGT
GGTCATTGTCGGAGGGACGG

Downstream 100 bases:

>100_bases
TTAAAAGAAACACGCTGCTGCGTATTGCCAAATACGTACTGGGTCTGTTCTTTATAGTTTCCTTGCTCGTCGTCTTCATG
TTGAGTAACTTGCTTTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSEYLRNQIVQKMLGEPKQSPARMPPARQAADTQPSSGSGPLGAAEVDAANALGAAYYQYPGYFKKGQGGLAGYQREKLA
AEFGWSPAGMGKYEAALRAGPLNGLAAWGDSRTASAVAPELNVPECAPGNGYARANKRPHNDCRDAFRHAYWSALMAQRD
EEDAAMLGDAYERSSKGPYAEVYMDLYNNRVGRRIGSANKDASGEQIFDLVADELEKRRLITSPFQALKR

Sequences:

>Translated_230_residues
MSEYLRNQIVQKMLGEPKQSPARMPPARQAADTQPSSGSGPLGAAEVDAANALGAAYYQYPGYFKKGQGGLAGYQREKLA
AEFGWSPAGMGKYEAALRAGPLNGLAAWGDSRTASAVAPELNVPECAPGNGYARANKRPHNDCRDAFRHAYWSALMAQRD
EEDAAMLGDAYERSSKGPYAEVYMDLYNNRVGRRIGSANKDASGEQIFDLVADELEKRRLITSPFQALKR
>Mature_229_residues
SEYLRNQIVQKMLGEPKQSPARMPPARQAADTQPSSGSGPLGAAEVDAANALGAAYYQYPGYFKKGQGGLAGYQREKLAA
EFGWSPAGMGKYEAALRAGPLNGLAAWGDSRTASAVAPELNVPECAPGNGYARANKRPHNDCRDAFRHAYWSALMAQRDE
EDAAMLGDAYERSSKGPYAEVYMDLYNNRVGRRIGSANKDASGEQIFDLVADELEKRRLITSPFQALKR

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24985; Mature: 24854

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYLRNQIVQKMLGEPKQSPARMPPARQAADTQPSSGSGPLGAAEVDAANALGAAYYQY
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
PGYFKKGQGGLAGYQREKLAAEFGWSPAGMGKYEAALRAGPLNGLAAWGDSRTASAVAPE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHCCCCCCHHHCCCC
LNVPECAPGNGYARANKRPHNDCRDAFRHAYWSALMAQRDEEDAAMLGDAYERSSKGPYA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHH
EVYMDLYNNRVGRRIGSANKDASGEQIFDLVADELEKRRLITSPFQALKR
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEYLRNQIVQKMLGEPKQSPARMPPARQAADTQPSSGSGPLGAAEVDAANALGAAYYQY
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
PGYFKKGQGGLAGYQREKLAAEFGWSPAGMGKYEAALRAGPLNGLAAWGDSRTASAVAPE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHCCCCCCHHHCCCC
LNVPECAPGNGYARANKRPHNDCRDAFRHAYWSALMAQRDEEDAAMLGDAYERSSKGPYA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHH
EVYMDLYNNRVGRRIGSANKDASGEQIFDLVADELEKRRLITSPFQALKR
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA