| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150397027
Identifier: 150397027
GI number: 150397027
Start: 1904647
End: 1905015
Strand: Reverse
Name: 150397027
Synonym: Smed_1824
Alternate gene names: NA
Gene position: 1905015-1904647 (Counterclockwise)
Preceding gene: 150397030
Following gene: 150397026
Centisome position: 50.37
GC content: 62.87
Gene sequence:
>369_bases ATGTCGAGGCGGGCGCGCGCAGGCAAGCTTATCCCTCGTAGACAAACAGGCCGTAGAGCTGCGGCTGTACCCATGCGAGC CGAAGGCTGTCGACGACCCGCGGCCTTAGCACCGGAAGCGGATCGCTTCGACCGGAATCATCAACCAGGGGTGGGCTTCG GCTCGCCCTTTTCCGTTTCAGGAGAGACGAACATGGCAGAAGCCAAAGAGAAGACCACGCCCGTCAAGCTGCTCTACGAC GTGTGGGCGGCCGGCGACAGACGGGTATCGAAGGGGACGGTTCTCGACCTTCCGGTGAAGGCGGCGAAGGCCCTTATCCA GCAAGGCAAGGCTTCGAGAGCGGACCCGCTGCCCGGAGATACCGAATGA
Upstream 100 bases:
>100_bases AACGAATGTTCGCGTTTCATCGTGCTCCCAGTTGCCGTGTGCGGTAACAGCGATTCGCCGAAGGTTGAATCTATCCTTAA CTATCGCATAGATTGCGTCT
Downstream 100 bases:
>100_bases TCATCCGTGATGGTTCGTGGTCGCTCTACGATTACGACCAAATGACGGGCCGGTCGGTCTGGCATTATTTCGACGGGGAG AAGGACGTTTTTCGCGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSRRARAGKLIPRRQTGRRAAAVPMRAEGCRRPAALAPEADRFDRNHQPGVGFGSPFSVSGETNMAEAKEKTTPVKLLYD VWAAGDRRVSKGTVLDLPVKAAKALIQQGKASRADPLPGDTE
Sequences:
>Translated_122_residues MSRRARAGKLIPRRQTGRRAAAVPMRAEGCRRPAALAPEADRFDRNHQPGVGFGSPFSVSGETNMAEAKEKTTPVKLLYD VWAAGDRRVSKGTVLDLPVKAAKALIQQGKASRADPLPGDTE >Mature_121_residues SRRARAGKLIPRRQTGRRAAAVPMRAEGCRRPAALAPEADRFDRNHQPGVGFGSPFSVSGETNMAEAKEKTTPVKLLYDV WAAGDRRVSKGTVLDLPVKAAKALIQQGKASRADPLPGDTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13135; Mature: 13004
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRARAGKLIPRRQTGRRAAAVPMRAEGCRRPAALAPEADRFDRNHQPGVGFGSPFSVS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCEECC GETNMAEAKEKTTPVKLLYDVWAAGDRRVSKGTVLDLPVKAAKALIQQGKASRADPLPGD CCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCC TE CC >Mature Secondary Structure SRRARAGKLIPRRQTGRRAAAVPMRAEGCRRPAALAPEADRFDRNHQPGVGFGSPFSVS CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCEECC GETNMAEAKEKTTPVKLLYDVWAAGDRRVSKGTVLDLPVKAAKALIQQGKASRADPLPGD CCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCC TE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA