| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397018
Identifier: 150397018
GI number: 150397018
Start: 1896639
End: 1897745
Strand: Reverse
Name: 150397018
Synonym: Smed_1815
Alternate gene names: NA
Gene position: 1897745-1896639 (Counterclockwise)
Preceding gene: 150397019
Following gene: 150397017
Centisome position: 50.18
GC content: 67.21
Gene sequence:
>1107_bases ATGGCGAATTCCTACCTGTTCGGCGGCAATACGAGAGAGACACCCGAATCCGTCAGGCGCAAGCGCCAACTTGCCATGGC GATCATGGGGACGGCCGCACCGAAAAACATCGGCGAGGGACTGAACGCACTGGGCTCGGGCATCGTCGCAGGCATCATGA ACCGCCGGGCGGACAGGGCGGAAGACGAGGGCCGCAGCGCTGCCCGCGCCGCCTATGACGGGGCTCTTGGCGGCATGCCG GACCGGCAGGTCTCCAATGCGAGCGCATCCGCAGCGGCTCCGTCAAACTCCTCGCATTATCGCGACGCCATCGCCTCGCT GGAGAGCGCAGGAAGCGGGGACTATACGGCTATCGGACCGATGCATCCGAAACTTGGGCGTCCGCTCGGGCGATACCAGA TCATGGAAGCGAATATCGGACCCTGGTCCCGCGAGGCGCTGGGGCGCGAGGTGACGCCGGAAGAGTTCCTGTCGAGCCCC GAAATCCAGGACGCCATTTTCGACCACAAGTTCAATGCCTATGTGCAGGAATTCGGACCGGAAGGCGCCGCGCAGGCATG GTTTGCCGGTCCGGGCGGCGTCGGCAAGACGAGCCGCAAGGACGCGCTGGGAACCGATGTCGGCACCTATGGCCGCAAGT TCATGAACGTGCTCGGCCCGCGGGGTGAGCCGACAGAGGCCGGCAGAGCCGAGCCGCCGGCAGGAATGCCTCCGCCGCCT CCGGCGTCCCACTCGCCCTTCGTGCCTTCGTTCCCAGGCAAGGAAGCGGACGACCGGATAGCGGCTCCCTCCCTGACGCC GCCGAATGCGCGTCCCCCGGAACAGGCAATTCCGGCGCAGTTCCAGGGTTCTCGGCAGCTCGCCAATGCCCAGGGCGGCA TCATGCCGGCGCTGATGGACGGCACGCCTGCCTCGCCCGAGCAGGTGGCGCAGGCGCAGGCGATCGGCCGGCGGCAACAG GCACAGGCGCAAGCCGCCGATCTGATGCCGTTGCTCGAGGCCATGGGCAATCCCTGGCTCTCGCCCGAGGAGAGGGCGGT TCTGCACAGGCTCTACGAGCAGCAGGTGCAGTCAGCAGAGGCCCGGCGCAACCCGCGGTGGGAATAG
Upstream 100 bases:
>100_bases GCTTCCAGGACCTGGTGACGGCAATCGGGCCCTGGTCCCGCGAAGGGCTCGGCCGGGCCGCTCAATTCCTCAACCAGGGC CGAAACGGAGGTCTGTACTG
Downstream 100 bases:
>100_bases ACCGTTCCGCCCGATCAAGATCGCAGAGGACCGCCGCAGGTTGAGCGGACGTGCTGCTTTTCGCCCACATTACCTTTTCC ATGGAGGCTACATTGCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MANSYLFGGNTRETPESVRRKRQLAMAIMGTAAPKNIGEGLNALGSGIVAGIMNRRADRAEDEGRSAARAAYDGALGGMP DRQVSNASASAAAPSNSSHYRDAIASLESAGSGDYTAIGPMHPKLGRPLGRYQIMEANIGPWSREALGREVTPEEFLSSP EIQDAIFDHKFNAYVQEFGPEGAAQAWFAGPGGVGKTSRKDALGTDVGTYGRKFMNVLGPRGEPTEAGRAEPPAGMPPPP PASHSPFVPSFPGKEADDRIAAPSLTPPNARPPEQAIPAQFQGSRQLANAQGGIMPALMDGTPASPEQVAQAQAIGRRQQ AQAQAADLMPLLEAMGNPWLSPEERAVLHRLYEQQVQSAEARRNPRWE
Sequences:
>Translated_368_residues MANSYLFGGNTRETPESVRRKRQLAMAIMGTAAPKNIGEGLNALGSGIVAGIMNRRADRAEDEGRSAARAAYDGALGGMP DRQVSNASASAAAPSNSSHYRDAIASLESAGSGDYTAIGPMHPKLGRPLGRYQIMEANIGPWSREALGREVTPEEFLSSP EIQDAIFDHKFNAYVQEFGPEGAAQAWFAGPGGVGKTSRKDALGTDVGTYGRKFMNVLGPRGEPTEAGRAEPPAGMPPPP PASHSPFVPSFPGKEADDRIAAPSLTPPNARPPEQAIPAQFQGSRQLANAQGGIMPALMDGTPASPEQVAQAQAIGRRQQ AQAQAADLMPLLEAMGNPWLSPEERAVLHRLYEQQVQSAEARRNPRWE >Mature_367_residues ANSYLFGGNTRETPESVRRKRQLAMAIMGTAAPKNIGEGLNALGSGIVAGIMNRRADRAEDEGRSAARAAYDGALGGMPD RQVSNASASAAAPSNSSHYRDAIASLESAGSGDYTAIGPMHPKLGRPLGRYQIMEANIGPWSREALGREVTPEEFLSSPE IQDAIFDHKFNAYVQEFGPEGAAQAWFAGPGGVGKTSRKDALGTDVGTYGRKFMNVLGPRGEPTEAGRAEPPAGMPPPPP ASHSPFVPSFPGKEADDRIAAPSLTPPNARPPEQAIPAQFQGSRQLANAQGGIMPALMDGTPASPEQVAQAQAIGRRQQA QAQAADLMPLLEAMGNPWLSPEERAVLHRLYEQQVQSAEARRNPRWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39052; Mature: 38921
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSYLFGGNTRETPESVRRKRQLAMAIMGTAAPKNIGEGLNALGSGIVAGIMNRRADRA CCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EDEGRSAARAAYDGALGGMPDRQVSNASASAAAPSNSSHYRDAIASLESAGSGDYTAIGP HHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECC MHPKLGRPLGRYQIMEANIGPWSREALGREVTPEEFLSSPEIQDAIFDHKFNAYVQEFGP CCHHHCCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCC EGAAQAWFAGPGGVGKTSRKDALGTDVGTYGRKFMNVLGPRGEPTEAGRAEPPAGMPPPP CCCCCCEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PASHSPFVPSFPGKEADDRIAAPSLTPPNARPPEQAIPAQFQGSRQLANAQGGIMPALMD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHCCCHHHHHCCCCCCHHHCC GTPASPEQVAQAQAIGRRQQAQAQAADLMPLLEAMGNPWLSPEERAVLHRLYEQQVQSAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH ARRNPRWE HHCCCCCC >Mature Secondary Structure ANSYLFGGNTRETPESVRRKRQLAMAIMGTAAPKNIGEGLNALGSGIVAGIMNRRADRA CCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EDEGRSAARAAYDGALGGMPDRQVSNASASAAAPSNSSHYRDAIASLESAGSGDYTAIGP HHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECC MHPKLGRPLGRYQIMEANIGPWSREALGREVTPEEFLSSPEIQDAIFDHKFNAYVQEFGP CCHHHCCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCC EGAAQAWFAGPGGVGKTSRKDALGTDVGTYGRKFMNVLGPRGEPTEAGRAEPPAGMPPPP CCCCCCEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PASHSPFVPSFPGKEADDRIAAPSLTPPNARPPEQAIPAQFQGSRQLANAQGGIMPALMD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHCCCHHHHHCCCCCCHHHCC GTPASPEQVAQAQAIGRRQQAQAQAADLMPLLEAMGNPWLSPEERAVLHRLYEQQVQSAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH ARRNPRWE HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA