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The map label for this gene is yfbS [C]

Identifier: 150397006

GI number: 150397006

Start: 1887117

End: 1888892

Strand: Reverse

Name: yfbS [C]

Synonym: Smed_1803

Alternate gene names: 150397006

Gene position: 1888892-1887117 (Counterclockwise)

Preceding gene: 150397009

Following gene: 150397005

Centisome position: 49.95

GC content: 62.73

Gene sequence:

>1776_bases
ATGACCGCCGAACAGTCCCTTTCGTTTATCGTGCTCGGCATCATGATGATCTTCTTCATGTGGGGGCGGTTTCGCTACGA
TATCGTGGCCTGCTCGGCGCTGATGCTCGCCGTTGCCGTCGGCATCGTTCCCTTCGATCACGCCTTTGACGGGTTCAGCG
ACGATATCGTCATCATCGTCGGCAGCGCGCTCATCGTCAGCGCGGGCGTGGCGCGTTCGGGGGTGGTCGATGCCGCCATC
CAGCGCTTTCTGCCGGAGCTGCAGTCCGTGAGGGCGCAGCTTGCTCTTCTTGTGGTCACGGTGACCATTCTTTCAGCCTT
CATAAAGAACATAGGCGCGCTTGCGATCATGATTCCGGTCGCGTTCCAGTTCGCGCGTCGCTCGAAAGTGCAGCCTTCGG
TATTTTTGATGCCGATGGCGTTCGGATCGCTGATCGGCGGGCTGATGACGCAGGTCGGCACATCGCCGAACGTGGTCGTG
TCGCGGGTGCGTGCGGATCTCACGGGTGAGAGCTTCACCATGTTCGACTTCACGCCCGTCGGTGCTTCGCTGGCTCTGGT
CGGCGCGGTGTTCCTGCTGTTCGGTTACAAGCTGGTGCCGGAGCGGAAGAGTCAGCAGGTCGGCATGGATCAGGCGGTCG
AGATCACCGACTATACGTCCGAGGCGGTGGTTCCTGCCGGTTCGCCTGTCATCGGCAAGCCGCTCAGCAATCTGGTCAAG
ATCGGCGACGGAGGAGCGGTCGTGATCGCCGTCTTCCGTCGCGGCACGCATCTGGCGCCCTTGCCCGACGTCGTCATCGA
GCTGGACGATATTCTACTGCTCGAAGGTGGTCCTGCGGCGCTCGATCGCATCGTTTCCCAAGCGAAACTCAAGATTTCCG
GCGATCGCTCGCCGATGCCGAACGACAAGGCGAAAGCCGATACCGAAGCAATCGAGGCGGTGATCGCCACCGGTTCCCCC
CTTATCGGCATGTCGGCGCAGCGCCTGGCGCTCTTCAACAATCACAACATCAACCTCTTGGCCGTCAGTCGCCAGGGCGA
ACGGTTGAAACAGAGGCTTGGCAGCATCCGGCTGCGCGCCGGCGATATCGTCGTGCTGCAGGGCACCCGCAGGGAGTTGC
CCTCGTTTCTTCAGGACTTCGGCTGCCTGCCGCTCGCGCAACGGGAAATCCTGCTGGGCACCATCCGCCGTGCCACCGTG
CCCCTGCTTGTGCTGGCGACCGCGATGGGCGCGACCGCGCTGGGCATCGTACCTGTGCAGATCGCATTTTTTGCTGCCGC
GCTTGCCATGGTGGTGTTTCGCGTTATTCCGCTACGCGACGTCTACCGTGCGGTGGACGGACCGATCCTGGTCATGCTTG
CCGCGCTCATCCCGGTCAGCGAGACGTTACGCACGACAGGCGGTTCGGATCTGATCGCGGGGTGGCTGAGCGGGATGGCT
GCTGATCTCCCTCCTGCCGGGGCGCTTGCCATCATGGTCGTGGCTGCCATGGCGGTCACCCCCTTCCTCAATAATGCCGC
TACGGTTCTCGTCATGGCCCCCATAGCGGCCAGTTTTGCGACGGCGCTCGATTACAGGCCGGACGCCTTCCTGATGGCAG
TTGCGATCGGCGCCGGCTCGGACTTCCTCACCCCGATCGGCCACCAGTGCAATACGCTGGTGATGGGACCCGGCGGCTAC
CGCTTCAGCGACTACCCGCGACTGGGGCTACCGCTCTCTATCGTCATCGTGATCGTCGCGGTGCCGATGCTGATGTGGAT
TTGGCCCCTGCGCTAA

Upstream 100 bases:

>100_bases
TGCGTACCTTCCGAGGGTATCGCGCGCTTGGTTCGGCGTTGGTGCGTGGGTCCGCAAACACTACCCGGTTCCCTGACGAG
TCGCTGCTTAGGTACGATCT

Downstream 100 bases:

>100_bases
AAGGGGATAGAAAAACTGCGCGCGGTTTTTCTATAGTCGTGAGCACGTCCGAGGCCAGGCTCTCGCCAAGTTGCAAGTAT
CCGGTGGAAACGGCATGATC

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 590

Protein sequence:

>591_residues
MTAEQSLSFIVLGIMMIFFMWGRFRYDIVACSALMLAVAVGIVPFDHAFDGFSDDIVIIVGSALIVSAGVARSGVVDAAI
QRFLPELQSVRAQLALLVVTVTILSAFIKNIGALAIMIPVAFQFARRSKVQPSVFLMPMAFGSLIGGLMTQVGTSPNVVV
SRVRADLTGESFTMFDFTPVGASLALVGAVFLLFGYKLVPERKSQQVGMDQAVEITDYTSEAVVPAGSPVIGKPLSNLVK
IGDGGAVVIAVFRRGTHLAPLPDVVIELDDILLLEGGPAALDRIVSQAKLKISGDRSPMPNDKAKADTEAIEAVIATGSP
LIGMSAQRLALFNNHNINLLAVSRQGERLKQRLGSIRLRAGDIVVLQGTRRELPSFLQDFGCLPLAQREILLGTIRRATV
PLLVLATAMGATALGIVPVQIAFFAAALAMVVFRVIPLRDVYRAVDGPILVMLAALIPVSETLRTTGGSDLIAGWLSGMA
ADLPPAGALAIMVVAAMAVTPFLNNAATVLVMAPIAASFATALDYRPDAFLMAVAIGAGSDFLTPIGHQCNTLVMGPGGY
RFSDYPRLGLPLSIVIVIVAVPMLMWIWPLR

Sequences:

>Translated_591_residues
MTAEQSLSFIVLGIMMIFFMWGRFRYDIVACSALMLAVAVGIVPFDHAFDGFSDDIVIIVGSALIVSAGVARSGVVDAAI
QRFLPELQSVRAQLALLVVTVTILSAFIKNIGALAIMIPVAFQFARRSKVQPSVFLMPMAFGSLIGGLMTQVGTSPNVVV
SRVRADLTGESFTMFDFTPVGASLALVGAVFLLFGYKLVPERKSQQVGMDQAVEITDYTSEAVVPAGSPVIGKPLSNLVK
IGDGGAVVIAVFRRGTHLAPLPDVVIELDDILLLEGGPAALDRIVSQAKLKISGDRSPMPNDKAKADTEAIEAVIATGSP
LIGMSAQRLALFNNHNINLLAVSRQGERLKQRLGSIRLRAGDIVVLQGTRRELPSFLQDFGCLPLAQREILLGTIRRATV
PLLVLATAMGATALGIVPVQIAFFAAALAMVVFRVIPLRDVYRAVDGPILVMLAALIPVSETLRTTGGSDLIAGWLSGMA
ADLPPAGALAIMVVAAMAVTPFLNNAATVLVMAPIAASFATALDYRPDAFLMAVAIGAGSDFLTPIGHQCNTLVMGPGGY
RFSDYPRLGLPLSIVIVIVAVPMLMWIWPLR
>Mature_590_residues
TAEQSLSFIVLGIMMIFFMWGRFRYDIVACSALMLAVAVGIVPFDHAFDGFSDDIVIIVGSALIVSAGVARSGVVDAAIQ
RFLPELQSVRAQLALLVVTVTILSAFIKNIGALAIMIPVAFQFARRSKVQPSVFLMPMAFGSLIGGLMTQVGTSPNVVVS
RVRADLTGESFTMFDFTPVGASLALVGAVFLLFGYKLVPERKSQQVGMDQAVEITDYTSEAVVPAGSPVIGKPLSNLVKI
GDGGAVVIAVFRRGTHLAPLPDVVIELDDILLLEGGPAALDRIVSQAKLKISGDRSPMPNDKAKADTEAIEAVIATGSPL
IGMSAQRLALFNNHNINLLAVSRQGERLKQRLGSIRLRAGDIVVLQGTRRELPSFLQDFGCLPLAQREILLGTIRRATVP
LLVLATAMGATALGIVPVQIAFFAAALAMVVFRVIPLRDVYRAVDGPILVMLAALIPVSETLRTTGGSDLIAGWLSGMAA
DLPPAGALAIMVVAAMAVTPFLNNAATVLVMAPIAASFATALDYRPDAFLMAVAIGAGSDFLTPIGHQCNTLVMGPGGYR
FSDYPRLGLPLSIVIVIVAVPMLMWIWPLR

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=615, Percent_Identity=29.5934959349594, Blast_Score=203, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 62568; Mature: 62437

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEQSLSFIVLGIMMIFFMWGRFRYDIVACSALMLAVAVGIVPFDHAFDGFSDDIVIIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
GSALIVSAGVARSGVVDAAIQRFLPELQSVRAQLALLVVTVTILSAFIKNIGALAIMIPV
CCHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFQFARRSKVQPSVFLMPMAFGSLIGGLMTQVGTSPNVVVSRVRADLTGESFTMFDFTPV
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCC
GASLALVGAVFLLFGYKLVPERKSQQVGMDQAVEITDYTSEAVVPAGSPVIGKPLSNLVK
CHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHE
IGDGGAVVIAVFRRGTHLAPLPDVVIELDDILLLEGGPAALDRIVSQAKLKISGDRSPMP
ECCCCEEEEEEECCCCCCCCCCHHHEEECCEEEECCCHHHHHHHHHHHEEEECCCCCCCC
NDKAKADTEAIEAVIATGSPLIGMSAQRLALFNNHNINLLAVSRQGERLKQRLGSIRLRA
CCCCHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCEEEEEECCCHHHHHHHHCCEEEEE
GDIVVLQGTRRELPSFLQDFGCLPLAQREILLGTIRRATVPLLVLATAMGATALGIVPVQ
CCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IAFFAAALAMVVFRVIPLRDVYRAVDGPILVMLAALIPVSETLRTTGGSDLIAGWLSGMA
HHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHH
ADLPPAGALAIMVVAAMAVTPFLNNAATVLVMAPIAASFATALDYRPDAFLMAVAIGAGS
CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCC
DFLTPIGHQCNTLVMGPGGYRFSDYPRLGLPLSIVIVIVAVPMLMWIWPLR
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAEQSLSFIVLGIMMIFFMWGRFRYDIVACSALMLAVAVGIVPFDHAFDGFSDDIVIIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
GSALIVSAGVARSGVVDAAIQRFLPELQSVRAQLALLVVTVTILSAFIKNIGALAIMIPV
CCHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFQFARRSKVQPSVFLMPMAFGSLIGGLMTQVGTSPNVVVSRVRADLTGESFTMFDFTPV
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCC
GASLALVGAVFLLFGYKLVPERKSQQVGMDQAVEITDYTSEAVVPAGSPVIGKPLSNLVK
CHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHE
IGDGGAVVIAVFRRGTHLAPLPDVVIELDDILLLEGGPAALDRIVSQAKLKISGDRSPMP
ECCCCEEEEEEECCCCCCCCCCHHHEEECCEEEECCCHHHHHHHHHHHEEEECCCCCCCC
NDKAKADTEAIEAVIATGSPLIGMSAQRLALFNNHNINLLAVSRQGERLKQRLGSIRLRA
CCCCHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCEEEEEECCCHHHHHHHHCCEEEEE
GDIVVLQGTRRELPSFLQDFGCLPLAQREILLGTIRRATVPLLVLATAMGATALGIVPVQ
CCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IAFFAAALAMVVFRVIPLRDVYRAVDGPILVMLAALIPVSETLRTTGGSDLIAGWLSGMA
HHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHH
ADLPPAGALAIMVVAAMAVTPFLNNAATVLVMAPIAASFATALDYRPDAFLMAVAIGAGS
CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCC
DFLTPIGHQCNTLVMGPGGYRFSDYPRLGLPLSIVIVIVAVPMLMWIWPLR
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]