Click here to switch to the map view.

The map label for this gene is ybfF [C]

Identifier: 150396993

GI number: 150396993

Start: 1872998

End: 1873861

Strand: Reverse

Name: ybfF [C]

Synonym: Smed_1790

Alternate gene names: 150396993

Gene position: 1873861-1872998 (Counterclockwise)

Preceding gene: 150396995

Following gene: 150396991

Centisome position: 49.55

GC content: 59.14

Gene sequence:

>864_bases
ATGTTCCGCACTATACTGTTCACCGTAGCTCTGCTTGTTGCAGGAACCACACTTGCCCAATCCGAACCGGCGGGCGATAG
GGTCAGCGTCAATGGCATGGAGATGTATTTCGAGGTTTCGGGCGAAGGCGATCCCTTGATCGTCCTGCATGGCGCCTACA
TGAACATTCCGTCTATGGGTGCCATTATCCCGAAGCTCGCAGAGACCCACAAGGTCTATGCAATCGAATTCCAAGGTCAC
GGCCGCACCACGGATATCGATCGGCCGATCACCTATTCCAATCTGGCCGACGACGTCGCAGCCTTCATGGATGCCGTGCA
GATCGAGAAGGCGGACGTTTTCGGCTACTCCATGGGCGCCGGTGCCGGCCTGCAGCTTGCCATTCGCCATCCGGGTAAAG
TGAAGAAGCTCGCCGCCGCCTCCGTAGCCTATGATGCCGAGGGCTGGCAACCGGAGTTCAAGGCCTTCATTCCCCAGATG
TCCGTCGAGATGTTCGTCAACATGCCGTTCGCTGAGGATTATCGTAAGCTCGCGGCCAATCCCGACGGCTTTCCCGAACT
CGTCAGGAAGCTGATAGCGCTCGAGAAGGAGCCCATGGCATGGGAGCCGGAGGTCAAGGCGCTGAAGACCCCGGTTCTCA
TCATCACCGGCGATGCGGATGTGGCGACGCTCGAACATTCGGTCGCGCTGTTCCGGCTGCTTGGCGGCGGCGTCATGGGC
GACATGGGCAAACCGCTGCCGGCTTCGCGGCTCGCCGTGCTTCCGGCTACGTCGCATACAGCCGTCATAAGTCAGCCCGA
CCTTCTTCATGCGTTCGTCGAGCCTTTTTTGCAGGGCAAAACGCCGAAGGGGTTTTTCGAATAG

Upstream 100 bases:

>100_bases
AGCCGCTGAGAAAATTCCGGGCTTGATGTCGGGGAGCGGGAACCTCGCTCGTCTTATCGTAGACGCCGGCATAGGTCGGG
TGAAAATCGAGGAGAGACAG

Downstream 100 bases:

>100_bases
GCAGCAACGCGCGAAGCAACAGTCGCCGGCAGGCATCAATGAAAAAGGGCATTCCGTTGGAATGCCCTATAGTTTGGTCT
TGCGGTCAATGCCGGGAGGT

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Hydrolase; Oxidoreductase; Lipolytic; 3-Oxoadipate Enol-Lactonase; Alpha/Beta Fold Family Hydrolase; Peroxidase Protein; Hydrolase Protein; Alpha/Beta Fold Superfamily Hydrolase; Hydrolase Alpha/Beta Fold Family; Peroxidase; Esterase/Lipase; Alpha/Beta Superfamily Hydrolase; Oxidoreductase Protein; Hydrolase Alpha/Beta Hydrolase Fold Family; B-Ketoadipate Enol-Lactone Hydrolase; 3-Oxoadipate Enol-Lactone Hydrolase; Pimeloyl-CoA Synthesis Protein; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Esterase YbfF; Alpha/Beta Hydrolase Fold-Domain Containing Protein; B-Ketoadipate Enol-Lactone Hydrolase Protein; Hydrolase Or Acyltransferase-Like Protein; Lactone Hydrolase; 3-Oxoadipate Enol-Lactonase I; Alpha/Beta Hydrolase Superfamily Protein; Fold Family Alpha/Beta Hydrolase; Arylesterase; Abhydrolase Domain-Containing Protein; Esterase/Lipase YbfF; Hydrolase Or Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Meta Cleavage Compound Hydrolase

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MFRTILFTVALLVAGTTLAQSEPAGDRVSVNGMEMYFEVSGEGDPLIVLHGAYMNIPSMGAIIPKLAETHKVYAIEFQGH
GRTTDIDRPITYSNLADDVAAFMDAVQIEKADVFGYSMGAGAGLQLAIRHPGKVKKLAAASVAYDAEGWQPEFKAFIPQM
SVEMFVNMPFAEDYRKLAANPDGFPELVRKLIALEKEPMAWEPEVKALKTPVLIITGDADVATLEHSVALFRLLGGGVMG
DMGKPLPASRLAVLPATSHTAVISQPDLLHAFVEPFLQGKTPKGFFE

Sequences:

>Translated_287_residues
MFRTILFTVALLVAGTTLAQSEPAGDRVSVNGMEMYFEVSGEGDPLIVLHGAYMNIPSMGAIIPKLAETHKVYAIEFQGH
GRTTDIDRPITYSNLADDVAAFMDAVQIEKADVFGYSMGAGAGLQLAIRHPGKVKKLAAASVAYDAEGWQPEFKAFIPQM
SVEMFVNMPFAEDYRKLAANPDGFPELVRKLIALEKEPMAWEPEVKALKTPVLIITGDADVATLEHSVALFRLLGGGVMG
DMGKPLPASRLAVLPATSHTAVISQPDLLHAFVEPFLQGKTPKGFFE
>Mature_287_residues
MFRTILFTVALLVAGTTLAQSEPAGDRVSVNGMEMYFEVSGEGDPLIVLHGAYMNIPSMGAIIPKLAETHKVYAIEFQGH
GRTTDIDRPITYSNLADDVAAFMDAVQIEKADVFGYSMGAGAGLQLAIRHPGKVKKLAAASVAYDAEGWQPEFKAFIPQM
SVEMFVNMPFAEDYRKLAANPDGFPELVRKLIALEKEPMAWEPEVKALKTPVLIITGDADVATLEHSVALFRLLGGGVMG
DMGKPLPASRLAVLPATSHTAVISQPDLLHAFVEPFLQGKTPKGFFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.-.- [C]

Molecular weight: Translated: 31020; Mature: 31020

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTILFTVALLVAGTTLAQSEPAGDRVSVNGMEMYFEVSGEGDPLIVLHGAYMNIPSMG
CHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCEEEEEEECCCCCCEEEEECCEECCCCHH
AIIPKLAETHKVYAIEFQGHGRTTDIDRPITYSNLADDVAAFMDAVQIEKADVFGYSMGA
HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCC
GAGLQLAIRHPGKVKKLAAASVAYDAEGWQPEFKAFIPQMSVEMFVNMPFAEDYRKLAAN
CCCEEEEEECCCHHHHHHHHHHEECCCCCCHHHHHHHCCCEEEHEEECCCHHHHHHHHCC
PDGFPELVRKLIALEKEPMAWEPEVKALKTPVLIITGDADVATLEHSVALFRLLGGGVMG
CCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC
DMGKPLPASRLAVLPATSHTAVISQPDLLHAFVEPFLQGKTPKGFFE
CCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFRTILFTVALLVAGTTLAQSEPAGDRVSVNGMEMYFEVSGEGDPLIVLHGAYMNIPSMG
CHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCEEEEEEECCCCCCEEEEECCEECCCCHH
AIIPKLAETHKVYAIEFQGHGRTTDIDRPITYSNLADDVAAFMDAVQIEKADVFGYSMGA
HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCC
GAGLQLAIRHPGKVKKLAAASVAYDAEGWQPEFKAFIPQMSVEMFVNMPFAEDYRKLAAN
CCCEEEEEECCCHHHHHHHHHHEECCCCCCHHHHHHHCCCEEEHEEECCCHHHHHHHHCC
PDGFPELVRKLIALEKEPMAWEPEVKALKTPVLIITGDADVATLEHSVALFRLLGGGVMG
CCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC
DMGKPLPASRLAVLPATSHTAVISQPDLLHAFVEPFLQGKTPKGFFE
CCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA