| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396984
Identifier: 150396984
GI number: 150396984
Start: 1864921
End: 1865223
Strand: Direct
Name: 150396984
Synonym: Smed_1781
Alternate gene names: NA
Gene position: 1864921-1865223 (Clockwise)
Preceding gene: 150396982
Following gene: 150396985
Centisome position: 49.31
GC content: 64.03
Gene sequence:
>303_bases ATGGCAGACCGCATTATCGTCTACTGGCGCGATATCCCCGCGCAAGTCATCATCAAACAGGGCCGCAAGAGCGCGAAACG CGAGCTATCGCTGCGCTTCACGGAGGCAATCGACATGTGCGCCATGCGCACTGGCGCCGCCGAAACCGACGACTACCTTG CCGAATGGCGCAAGGGGGATCCCGTTTCGGTCTCCGACGACCTCGAGGCCGAAGCGGACAAGGCGGCGGCCGAACTGGAG GCCGCCTTTGATCGGGAGCGCCTCGTCGCACTTGTTAAGGCCGGGGGCCGCGACAATGCCTGA
Upstream 100 bases:
>100_bases CGGCGGTGCAGCGTCGTTTTTGGACATATCGGACGTCGTGGCAAGGTGAGCCACGGCGCGTGGACATGCGCATTGTCGCC CTATAGGAGAACAGGATCCG
Downstream 100 bases:
>100_bases CCCGAAGGTCGTAACGGGCAACGCCCAGTCGGCCAAGAAGGCGGCAACCGGCGCCTATACGCCACAGGGCGTGTCCCCCA GCCGGCGCTCGCGCCACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MADRIIVYWRDIPAQVIIKQGRKSAKRELSLRFTEAIDMCAMRTGAAETDDYLAEWRKGDPVSVSDDLEAEADKAAAELE AAFDRERLVALVKAGGRDNA
Sequences:
>Translated_100_residues MADRIIVYWRDIPAQVIIKQGRKSAKRELSLRFTEAIDMCAMRTGAAETDDYLAEWRKGDPVSVSDDLEAEADKAAAELE AAFDRERLVALVKAGGRDNA >Mature_99_residues ADRIIVYWRDIPAQVIIKQGRKSAKRELSLRFTEAIDMCAMRTGAAETDDYLAEWRKGDPVSVSDDLEAEADKAAAELEA AFDRERLVALVKAGGRDNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11114; Mature: 10982
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRIIVYWRDIPAQVIIKQGRKSAKRELSLRFTEAIDMCAMRTGAAETDDYLAEWRKGD CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC PVSVSDDLEAEADKAAAELEAAFDRERLVALVKAGGRDNA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADRIIVYWRDIPAQVIIKQGRKSAKRELSLRFTEAIDMCAMRTGAAETDDYLAEWRKGD CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC PVSVSDDLEAEADKAAAELEAAFDRERLVALVKAGGRDNA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA