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The map label for this gene is 150396960

Identifier: 150396960

GI number: 150396960

Start: 1837198

End: 1837623

Strand: Reverse

Name: 150396960

Synonym: Smed_1757

Alternate gene names: NA

Gene position: 1837623-1837198 (Counterclockwise)

Preceding gene: 150396961

Following gene: 150396958

Centisome position: 48.59

GC content: 61.74

Gene sequence:

>426_bases
ATGACGCAGAGCTGGCAGTTCTGGGCGCTGCTGTCCGCGGCCTTCGCAGCGCTGACTGCCATCTTCGCCAAAGTCGGTGT
CGCCAATGTCAACTCCGATTTCGCGACGCTGATCCGGACGGGTGTCATTCTTGTTGTGGTCGTCGGCATCGTTGCCGCGA
CCGGACAATGGCAGCGCCCGACGGAGATTTCCGGGCGGACCTGGCTCTTCCTTGGCCTATCCGGTCTTGCGACAGGGGCC
TCCTGGCTTGCCTATTTTCGCGCGTTGAAGCTCGGCGATGCCGCTCGCGTCGCACCGATCGACAAGCTGTCGATCGTGTT
GGTTGCACTGTTCGGCGTGCTTTTTCTCGGCGAGAAACTCAACCTGATGAACTGGCTCGGTGTGGGCCTGATCGCGGCTG
GCGCTCTGCTGCTGGCGGTATTCTGA

Upstream 100 bases:

>100_bases
AGGAGGACCTGATTGAGATTGCAGATCTTGTGACGGAGATGGAATTGGTGAAGCATCCATTCCGCTCGGGTATCAAGGGC
CAGAAGGGCGTCGAATTCTG

Downstream 100 bases:

>100_bases
TAGTTCTGCACAACGGTCACCGCGGACTTCCGGTTAGGCTGTCGGTATCAGACAGCCCGGCGTATTGGCCGGCGTGTTGG
CCGGCGTATTGGATTGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTQSWQFWALLSAAFAALTAIFAKVGVANVNSDFATLIRTGVILVVVVGIVAATGQWQRPTEISGRTWLFLGLSGLATGA
SWLAYFRALKLGDAARVAPIDKLSIVLVALFGVLFLGEKLNLMNWLGVGLIAAGALLLAVF

Sequences:

>Translated_141_residues
MTQSWQFWALLSAAFAALTAIFAKVGVANVNSDFATLIRTGVILVVVVGIVAATGQWQRPTEISGRTWLFLGLSGLATGA
SWLAYFRALKLGDAARVAPIDKLSIVLVALFGVLFLGEKLNLMNWLGVGLIAAGALLLAVF
>Mature_140_residues
TQSWQFWALLSAAFAALTAIFAKVGVANVNSDFATLIRTGVILVVVVGIVAATGQWQRPTEISGRTWLFLGLSGLATGAS
WLAYFRALKLGDAARVAPIDKLSIVLVALFGVLFLGEKLNLMNWLGVGLIAAGALLLAVF

Specific function: Unknown

COG id: COG2510

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 14906; Mature: 14775

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSWQFWALLSAAFAALTAIFAKVGVANVNSDFATLIRTGVILVVVVGIVAATGQWQRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TEISGRTWLFLGLSGLATGASWLAYFRALKLGDAARVAPIDKLSIVLVALFGVLFLGEKL
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH
NLMNWLGVGLIAAGALLLAVF
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQSWQFWALLSAAFAALTAIFAKVGVANVNSDFATLIRTGVILVVVVGIVAATGQWQRP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TEISGRTWLFLGLSGLATGASWLAYFRALKLGDAARVAPIDKLSIVLVALFGVLFLGEKL
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH
NLMNWLGVGLIAAGALLLAVF
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]