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The map label for this gene is 150396914

Identifier: 150396914

GI number: 150396914

Start: 1789875

End: 1790450

Strand: Direct

Name: 150396914

Synonym: Smed_1711

Alternate gene names: NA

Gene position: 1789875-1790450 (Clockwise)

Preceding gene: 150396911

Following gene: 150396915

Centisome position: 47.33

GC content: 58.16

Gene sequence:

>576_bases
ATGAAACCGTTACTCGGCTTCAGCCGACTTATCGACACCATCACGGAAAAGATCGGCAAGGCGGTCTCGTGGCTCATCCT
GGTGGCGGTGCTCGTGAGCGCCGGCAACGCCATCATCCGAAAAGCGTTCAACATGTCGTCCAATGCATGGCTCGAGGCGC
AGTGGTATCTCTTCGGCGCCGCCTTCATGTTCGCGGCCGCTTACACGCTGAGCCAGAATGAGCACATCCGTATCGACGTC
GTCTATGGAATGTTCTCGCGCCGCGTACAGCACTGGATCGACCTCTTCGGGCACGTCTTCTTCCTGATGCCGTTCGTGGT
TCTTATGCTCTATTACCTCGTGCCCTACGTGCGCATGTCCTATGTCTCGGGTGAACTTTCCTCGAGCGCGGGCGGGCTCG
TCATCTGGCCGGCGAAAGCGATCCTGCTGATCGGCTTCGTGCTTCTCGCCCTGCAGGGCGTTTCGGAAATCATCAAGAAA
ATCGCCATCATGACCGGCAACATGGACGATCCGACGCCTTATGTTCCTGCGCATGCACCGCTCGATGACGTCGTATCGCC
GGAGGCGCGTTCATGA

Upstream 100 bases:

>100_bases
CTATCCCCGAAAATCGAGTGCCGGACTTGAAAGCAGGCTTGAAATCGGCACTGTGCCTGTGCTTGGCAAAAAACAAAAAA
TCAATGCGGGGAGGAACTCG

Downstream 100 bases:

>100_bases
TCGAGTTCGTCGCTGAAAACCTGGCGCCCATCATGTTCGTGTCGCTGATCGTGTTCCTTCTGCTCGGATACCCGGTCGCC
TTCTCGCTCGCCGCCAACGG

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; TRAP-Type Transporter Small Permease Component; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; Small Permease Of TRAP-Type Transporter; Trap-Type Transport System Small Permease Component; TRAP-Type Large Permease Component; Mannitol Transporter; Transporter DctQ Related Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; TRAP-Type Transport System Small Permease Component; TRAP Transporter Small Subunit; Tripartite ATP-Independent Periplasmic Protein; Tripartite ATP-Independent Periplasmic; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKPLLGFSRLIDTITEKIGKAVSWLILVAVLVSAGNAIIRKAFNMSSNAWLEAQWYLFGAAFMFAAAYTLSQNEHIRIDV
VYGMFSRRVQHWIDLFGHVFFLMPFVVLMLYYLVPYVRMSYVSGELSSSAGGLVIWPAKAILLIGFVLLALQGVSEIIKK
IAIMTGNMDDPTPYVPAHAPLDDVVSPEARS

Sequences:

>Translated_191_residues
MKPLLGFSRLIDTITEKIGKAVSWLILVAVLVSAGNAIIRKAFNMSSNAWLEAQWYLFGAAFMFAAAYTLSQNEHIRIDV
VYGMFSRRVQHWIDLFGHVFFLMPFVVLMLYYLVPYVRMSYVSGELSSSAGGLVIWPAKAILLIGFVLLALQGVSEIIKK
IAIMTGNMDDPTPYVPAHAPLDDVVSPEARS
>Mature_191_residues
MKPLLGFSRLIDTITEKIGKAVSWLILVAVLVSAGNAIIRKAFNMSSNAWLEAQWYLFGAAFMFAAAYTLSQNEHIRIDV
VYGMFSRRVQHWIDLFGHVFFLMPFVVLMLYYLVPYVRMSYVSGELSSSAGGLVIWPAKAILLIGFVLLALQGVSEIIKK
IAIMTGNMDDPTPYVPAHAPLDDVVSPEARS

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21232; Mature: 21232

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLGFSRLIDTITEKIGKAVSWLILVAVLVSAGNAIIRKAFNMSSNAWLEAQWYLFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEHHHHHHHH
AFMFAAAYTLSQNEHIRIDVVYGMFSRRVQHWIDLFGHVFFLMPFVVLMLYYLVPYVRMS
HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSGELSSSAGGLVIWPAKAILLIGFVLLALQGVSEIIKKIAIMTGNMDDPTPYVPAHAP
HHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LDDVVSPEARS
HHHHCCCCCCC
>Mature Secondary Structure
MKPLLGFSRLIDTITEKIGKAVSWLILVAVLVSAGNAIIRKAFNMSSNAWLEAQWYLFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEHHHHHHHH
AFMFAAAYTLSQNEHIRIDVVYGMFSRRVQHWIDLFGHVFFLMPFVVLMLYYLVPYVRMS
HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSGELSSSAGGLVIWPAKAILLIGFVLLALQGVSEIIKKIAIMTGNMDDPTPYVPAHAP
HHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LDDVVSPEARS
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA