| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is zur [H]
Identifier: 150396898
GI number: 150396898
Start: 1773899
End: 1774297
Strand: Reverse
Name: zur [H]
Synonym: Smed_1694
Alternate gene names: 150396898
Gene position: 1774297-1773899 (Counterclockwise)
Preceding gene: 150396899
Following gene: 150396893
Centisome position: 46.92
GC content: 59.9
Gene sequence:
>399_bases ATGGCTACGCCTCAACTGACAAAGAACCAGGCGCTGGTCATGGGGGCACTAACCCATTCAGACGGGCCGCTGAGCGCCTA TACCATCCTCGATAAGCTGCGCGACCAGGGATTTCGCGCACCGTTGCAAGTCTACCGCGCGCTCGACAAATTGCTTGAAT ACGGCCTGGTTCATCGCCTGGAGAGCCTCAACGCTTTCGTCGCGTGCGCGTGCCCGCATGAACACGAGCACGAGCATGGC GTCACGGCCTTTACCATCTGCGAAGGCTGCGGTCAGGTGACCGAGCTCCAGGACGAGGTGATCGAGGAACGGCTGTCGAC GCTGGCGCGTGCGCAGGAGTTCAAAACGGAGAAGACGACGATTGAAATCCGGGGTCAGTGCAAGAGCTGCGCCATATAG
Upstream 100 bases:
>100_bases CTATCGTGGTTGCGGCGCTGGCTCTTTTCGTGCTGAGTCTGCTGCCGGTCGGTCGCCGGATCGAGAGCGCCCCGCATTCT TCGCATGGAGGACATCACTG
Downstream 100 bases:
>100_bases GCTCCGGAAATTGGACGGAGTGTGGATCAATCCAGCAGCGTGAGCTGGGCAGCGTAGCGCTGCCAGTTCTTCACATAGTG TTCGGCCGAGCGCTTCAATC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MATPQLTKNQALVMGALTHSDGPLSAYTILDKLRDQGFRAPLQVYRALDKLLEYGLVHRLESLNAFVACACPHEHEHEHG VTAFTICEGCGQVTELQDEVIEERLSTLARAQEFKTEKTTIEIRGQCKSCAI
Sequences:
>Translated_132_residues MATPQLTKNQALVMGALTHSDGPLSAYTILDKLRDQGFRAPLQVYRALDKLLEYGLVHRLESLNAFVACACPHEHEHEHG VTAFTICEGCGQVTELQDEVIEERLSTLARAQEFKTEKTTIEIRGQCKSCAI >Mature_131_residues ATPQLTKNQALVMGALTHSDGPLSAYTILDKLRDQGFRAPLQVYRALDKLLEYGLVHRLESLNAFVACACPHEHEHEHGV TAFTICEGCGQVTELQDEVIEERLSTLARAQEFKTEKTTIEIRGQCKSCAI
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=127, Percent_Identity=39.3700787401575, Blast_Score=81, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 14670; Mature: 14539
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPQLTKNQALVMGALTHSDGPLSAYTILDKLRDQGFRAPLQVYRALDKLLEYGLVHRL CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ESLNAFVACACPHEHEHEHGVTAFTICEGCGQVTELQDEVIEERLSTLARAQEFKTEKTT HHHCCEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE IEIRGQCKSCAI EEECCCCCCCCC >Mature Secondary Structure ATPQLTKNQALVMGALTHSDGPLSAYTILDKLRDQGFRAPLQVYRALDKLLEYGLVHRL CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ESLNAFVACACPHEHEHEHGVTAFTICEGCGQVTELQDEVIEERLSTLARAQEFKTEKTT HHHCCEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE IEIRGQCKSCAI EEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]