| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is mhpC [C]
Identifier: 150396886
GI number: 150396886
Start: 1762667
End: 1763488
Strand: Direct
Name: mhpC [C]
Synonym: Smed_1681
Alternate gene names: 150396886
Gene position: 1762667-1763488 (Clockwise)
Preceding gene: 150396885
Following gene: 150396887
Centisome position: 46.61
GC content: 59.73
Gene sequence:
>822_bases GTGGTTGAACCGATTTCCCAAGAGCATTTTTCAACGCTGAAGCGGACCGTCGTGCTGCCGAACGCGCTCCGGCTCGCGTA TATCGAGATGGGCGACCCCAACGGCGTGCCCATCCTCCTGCTCCATGGTTTTACCGACAGCGCCCGAAGCTGGAGCCTCG CCGCACCATATCTGGCGCCGGGTTTTCGCGTCGTAGCCGCAGACCTGCGGGGCCATGGGAATTCCGACCAGCCTGAGGGC TGCTACACTATTCCCGAGCTGGCGAATGATGTCCGGTTGCTGATGGTGGCCTTGGACCTTGCGCCGTGCCACCTAGTCGG CCATTCGCTTGGTGGACGGCTTGTGCAAGCGCTCGCTGAGCGGTGGCCCCATCTCGTCCGAAAAATCGTTCTTATGTCGA CCTCCGCCGCACTGCGCGAGCGTCAGGGATGGTTGTGGGAAAACATCCAGATGCTCAGCGATCCGATCGATCCAGAAAGC GCATTCATCCGGGAATGGTGCTCTGGCGCAGGTCTGATCGACGTGGATTTTCTGGCCCATGCGCGACGCGAAAGCGCCGC CCTTCCGTCAAGAATCTGGCATTCGATCTATTACGAGCAGCTTGCCTACGATCCGTCGCCGCTTTTGCAGGATATTTCCG CGGCGACGCTCATCCTGCGGGGCGAGAAGGACACGATCGCGACTGAGGAACATCAGGTCCAGATGAAAGACGCGATCGCC GGCGCGGAGATCATTTCTCTTCCCGAGCACGGCCATAACATCCATTGGGAAGCCCCCGAAAAGGTGGCCCACTTGATTTT GACGTTTCTCGATCGTCCGTGA
Upstream 100 bases:
>100_bases TTCGCCATTACGCTGAGAGTTCCGATGCCGGCCCGAAGCGGACACTACAATAGCCACAGTTACAGGAACAATATGAATTC AACCTTGAAGGTGGACGTGT
Downstream 100 bases:
>100_bases CCGCGTTTGCGCTCTCTTAGCGTTCAAATCGACGGCGTGAACTTTCCGGCCTGACGGATCGAACCGGAAACATCGACCGA AAGCCGCCGCTCTCCGATGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Atropine acylhydrolase; Atropinesterase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MVEPISQEHFSTLKRTVVLPNALRLAYIEMGDPNGVPILLLHGFTDSARSWSLAAPYLAPGFRVVAADLRGHGNSDQPEG CYTIPELANDVRLLMVALDLAPCHLVGHSLGGRLVQALAERWPHLVRKIVLMSTSAALRERQGWLWENIQMLSDPIDPES AFIREWCSGAGLIDVDFLAHARRESAALPSRIWHSIYYEQLAYDPSPLLQDISAATLILRGEKDTIATEEHQVQMKDAIA GAEIISLPEHGHNIHWEAPEKVAHLILTFLDRP
Sequences:
>Translated_273_residues MVEPISQEHFSTLKRTVVLPNALRLAYIEMGDPNGVPILLLHGFTDSARSWSLAAPYLAPGFRVVAADLRGHGNSDQPEG CYTIPELANDVRLLMVALDLAPCHLVGHSLGGRLVQALAERWPHLVRKIVLMSTSAALRERQGWLWENIQMLSDPIDPES AFIREWCSGAGLIDVDFLAHARRESAALPSRIWHSIYYEQLAYDPSPLLQDISAATLILRGEKDTIATEEHQVQMKDAIA GAEIISLPEHGHNIHWEAPEKVAHLILTFLDRP >Mature_273_residues MVEPISQEHFSTLKRTVVLPNALRLAYIEMGDPNGVPILLLHGFTDSARSWSLAAPYLAPGFRVVAADLRGHGNSDQPEG CYTIPELANDVRLLMVALDLAPCHLVGHSLGGRLVQALAERWPHLVRKIVLMSTSAALRERQGWLWENIQMLSDPIDPES AFIREWCSGAGLIDVDFLAHARRESAALPSRIWHSIYYEQLAYDPSPLLQDISAATLILRGEKDTIATEEHQVQMKDAIA GAEIISLPEHGHNIHWEAPEKVAHLILTFLDRP
Specific function: Alkaloid degradation [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
Organism=Homo sapiens, GI218777840, Length=283, Percent_Identity=28.6219081272085, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI13376164, Length=283, Percent_Identity=28.6219081272085, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI218777837, Length=281, Percent_Identity=25.9786476868327, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27597073, Length=304, Percent_Identity=21.7105263157895, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17554012, Length=125, Percent_Identity=29.6, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.10 [H]
Molecular weight: Translated: 30358; Mature: 30358
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEPISQEHFSTLKRTVVLPNALRLAYIEMGDPNGVPILLLHGFTDSARSWSLAAPYLAP CCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCC GFRVVAADLRGHGNSDQPEGCYTIPELANDVRLLMVALDLAPCHLVGHSLGGRLVQALAE CCEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWPHLVRKIVLMSTSAALRERQGWLWENIQMLSDPIDPESAFIREWCSGAGLIDVDFLAH HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEHHHHHH ARRESAALPSRIWHSIYYEQLAYDPSPLLQDISAATLILRGEKDTIATEEHQVQMKDAIA HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHC GAEIISLPEHGHNIHWEAPEKVAHLILTFLDRP CCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MVEPISQEHFSTLKRTVVLPNALRLAYIEMGDPNGVPILLLHGFTDSARSWSLAAPYLAP CCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCC GFRVVAADLRGHGNSDQPEGCYTIPELANDVRLLMVALDLAPCHLVGHSLGGRLVQALAE CCEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWPHLVRKIVLMSTSAALRERQGWLWENIQMLSDPIDPESAFIREWCSGAGLIDVDFLAH HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEHHHHHH ARRESAALPSRIWHSIYYEQLAYDPSPLLQDISAATLILRGEKDTIATEEHQVQMKDAIA HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHC GAEIISLPEHGHNIHWEAPEKVAHLILTFLDRP CCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA