Click here to switch to the map view.

The map label for this gene is 150396869

Identifier: 150396869

GI number: 150396869

Start: 1753828

End: 1755081

Strand: Reverse

Name: 150396869

Synonym: Smed_1664

Alternate gene names: NA

Gene position: 1755081-1753828 (Counterclockwise)

Preceding gene: 150396871

Following gene: 150396868

Centisome position: 46.41

GC content: 62.2

Gene sequence:

>1254_bases
ATGAGCCAGGAAGCCACAATCCGACGCGGTGTGCGCAATGCACGCTATGCGGCAATACCGAACCATGTCTTTGAGGATGC
GCGGCTGTCGATGGAAGCAAGGTGGCTCTTGAGCTACCTGCTCTCCAAGCCAGACAACTGGACCGTCGTCATCGGCGATA
TCATCAAAAAGGGCAATTGCGGGCGCGACAAGGCTCGCAAGATGATCGCCGAGTTGGTCGACATTGGTTATGCAGAGCGC
GAACAGCAGCGCGAGGACGGCAAATTCGGAGCTTCAGTGCTCGTGATCTTCGACGAGCCGCGCTGCGCCACGGCCGCTGA
AAACGCGGCCGAAGCGTCTGGTGTTGCAATTCTACCGCAGACGGATTTACCGGCGACGGCATTACCGGCGCCGGTTTCGC
CGGCGCCGGTAAAATCGGCACATAGTAATAACTCAGATTCAGCAAATACTGATTATCAGAATCTGAGAGAGGGCGGGCGC
GATGCTCCGGAAGATGGGCAGGAGCCGGAAGATCCGAGGAAGATCGACGCTGCCTTCTGGGCGCTGGTGAAGGATTGGCC
CGGCTTCGCCGGCATGCCGAAAGAACCGGCGCGGAAAGGTTGGTTCGCTCTGACGGCTGACGAGCGCCGGGAAGCGTCCG
AGCGCTTCGCGCGGTGGCTGCAGCTGCTGAAGGCGCAGAAGAAATCCCACACCCCGGCACCATCGACCTACTTCGGCGAA
AAGCTCTGGATGGATGTTCCTGCGCAGGATGAGGCGGCGAAACCTGCGAACGCCATGGCTGCGCCGTTCGGCAAGCTCTG
GTCGGCGACGCGGATCGCCGAGCTGCTGCTGCCGCCGTCTGGGATCGTCGCTCCTCCGACGAAGTTCGAACAGATGCAGA
TCGACGCCGGGCAGGTGTCGCTTGCCGACGTGATGGCCGAGAAGCGCATGCGGGCAGGATGGCCGTCGGTGAACAGCATG
CAGGAACGGGCACGCTCGGCGCAGGGCTCGATGTGCCCGCTGGCGCTTGAAGAGGCGGGGCAGGGCTTTCAGGCGGTGAA
GCGTGACGGCGATCTGCTTGCCGCGTGGCAGCGTGAGCACAAGCGGCGCGGCTGGCCCTTTCCGGAAGGGCGCTTGCCTG
AATGGGTCTATTTCCCGGCGCTCGAGGGCGAGGGCGATCTCGACTTCCTCGTGGCCGAAGCGGTCGAGCGCTACCGCGAA
CGAATTTTCGATTATCTCGCGAACAGGAGCAAAGGCGATGATCATGCAGCGTAG

Upstream 100 bases:

>100_bases
AATTGCGCGATGCTGCCCAAACGTTCCGTCAGTTGAATAGTTCCGGCAGAGAGCTTGTGAACACATCGTTGGCCCAAAGG
GCGGCTTCACGGGGCGTAGA

Downstream 100 bases:

>100_bases
CACGTTTGACGGAAGCCCGATTGCGCTGCAGGGCCATGATCGTTTCGCCGATCGGATGCGGAGAATCAGCGACGGCCTGC
TCGACGAGGGCGCGCTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSQEATIRRGVRNARYAAIPNHVFEDARLSMEARWLLSYLLSKPDNWTVVIGDIIKKGNCGRDKARKMIAELVDIGYAER
EQQREDGKFGASVLVIFDEPRCATAAENAAEASGVAILPQTDLPATALPAPVSPAPVKSAHSNNSDSANTDYQNLREGGR
DAPEDGQEPEDPRKIDAAFWALVKDWPGFAGMPKEPARKGWFALTADERREASERFARWLQLLKAQKKSHTPAPSTYFGE
KLWMDVPAQDEAAKPANAMAAPFGKLWSATRIAELLLPPSGIVAPPTKFEQMQIDAGQVSLADVMAEKRMRAGWPSVNSM
QERARSAQGSMCPLALEEAGQGFQAVKRDGDLLAAWQREHKRRGWPFPEGRLPEWVYFPALEGEGDLDFLVAEAVERYRE
RIFDYLANRSKGDDHAA

Sequences:

>Translated_417_residues
MSQEATIRRGVRNARYAAIPNHVFEDARLSMEARWLLSYLLSKPDNWTVVIGDIIKKGNCGRDKARKMIAELVDIGYAER
EQQREDGKFGASVLVIFDEPRCATAAENAAEASGVAILPQTDLPATALPAPVSPAPVKSAHSNNSDSANTDYQNLREGGR
DAPEDGQEPEDPRKIDAAFWALVKDWPGFAGMPKEPARKGWFALTADERREASERFARWLQLLKAQKKSHTPAPSTYFGE
KLWMDVPAQDEAAKPANAMAAPFGKLWSATRIAELLLPPSGIVAPPTKFEQMQIDAGQVSLADVMAEKRMRAGWPSVNSM
QERARSAQGSMCPLALEEAGQGFQAVKRDGDLLAAWQREHKRRGWPFPEGRLPEWVYFPALEGEGDLDFLVAEAVERYRE
RIFDYLANRSKGDDHAA
>Mature_416_residues
SQEATIRRGVRNARYAAIPNHVFEDARLSMEARWLLSYLLSKPDNWTVVIGDIIKKGNCGRDKARKMIAELVDIGYAERE
QQREDGKFGASVLVIFDEPRCATAAENAAEASGVAILPQTDLPATALPAPVSPAPVKSAHSNNSDSANTDYQNLREGGRD
APEDGQEPEDPRKIDAAFWALVKDWPGFAGMPKEPARKGWFALTADERREASERFARWLQLLKAQKKSHTPAPSTYFGEK
LWMDVPAQDEAAKPANAMAAPFGKLWSATRIAELLLPPSGIVAPPTKFEQMQIDAGQVSLADVMAEKRMRAGWPSVNSMQ
ERARSAQGSMCPLALEEAGQGFQAVKRDGDLLAAWQREHKRRGWPFPEGRLPEWVYFPALEGEGDLDFLVAEAVERYRER
IFDYLANRSKGDDHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46244; Mature: 46112

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEATIRRGVRNARYAAIPNHVFEDARLSMEARWLLSYLLSKPDNWTVVIGDIIKKGNC
CCCHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCC
GRDKARKMIAELVDIGYAEREQQREDGKFGASVLVIFDEPRCATAAENAAEASGVAILPQ
CHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEECC
TDLPATALPAPVSPAPVKSAHSNNSDSANTDYQNLREGGRDAPEDGQEPEDPRKIDAAFW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
ALVKDWPGFAGMPKEPARKGWFALTADERREASERFARWLQLLKAQKKSHTPAPSTYFGE
HHHHHCCCCCCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KLWMDVPAQDEAAKPANAMAAPFGKLWSATRIAELLLPPSGIVAPPTKFEQMQIDAGQVS
HHEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCHH
LADVMAEKRMRAGWPSVNSMQERARSAQGSMCPLALEEAGQGFQAVKRDGDLLAAWQREH
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHCCCCHHHHHHHHH
KRRGWPFPEGRLPEWVYFPALEGEGDLDFLVAEAVERYRERIFDYLANRSKGDDHAA
HHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SQEATIRRGVRNARYAAIPNHVFEDARLSMEARWLLSYLLSKPDNWTVVIGDIIKKGNC
CCHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCC
GRDKARKMIAELVDIGYAEREQQREDGKFGASVLVIFDEPRCATAAENAAEASGVAILPQ
CHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEECC
TDLPATALPAPVSPAPVKSAHSNNSDSANTDYQNLREGGRDAPEDGQEPEDPRKIDAAFW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
ALVKDWPGFAGMPKEPARKGWFALTADERREASERFARWLQLLKAQKKSHTPAPSTYFGE
HHHHHCCCCCCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KLWMDVPAQDEAAKPANAMAAPFGKLWSATRIAELLLPPSGIVAPPTKFEQMQIDAGQVS
HHEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCHH
LADVMAEKRMRAGWPSVNSMQERARSAQGSMCPLALEEAGQGFQAVKRDGDLLAAWQREH
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHCCCCHHHHHHHHH
KRRGWPFPEGRLPEWVYFPALEGEGDLDFLVAEAVERYRERIFDYLANRSKGDDHAA
HHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA