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The map label for this gene is 150396865

Identifier: 150396865

GI number: 150396865

Start: 1749380

End: 1751422

Strand: Reverse

Name: 150396865

Synonym: Smed_1660

Alternate gene names: NA

Gene position: 1751422-1749380 (Counterclockwise)

Preceding gene: 150396866

Following gene: 150396864

Centisome position: 46.31

GC content: 64.76

Gene sequence:

>2043_bases
ATGACCGTGCTGTTCAATCCCGAGCGGCTCGCTCTCAGCGTGCTTGCCGAGATCTGCGAACCGCCGCCGGCAGTCGATTA
TCTCGACTGGGCGAAGCGGAACATCGTGTTCTCGGAACGCATCACGGACCATCCGGGGCCGTACAACGAAGACCTGGTGC
CGTTCTTCTCGGAGATCCTGCGAGCGTTGTCGCCGGAAGATCCGTGCAACATCGTCAGCCTGGCGAAGTCGGCGCAGATC
GGCGGTACCATCTGCGCCAACATCTTCACGCTCGGCTCGCTCGACATGGCGCCCGGCGATTTCCTCTATGTCCACCCGAC
CGAGGAGAACGCCGCCCGCTGGTCGAAGACGAAGCTGATGCCGCTGGTGCGCGAGATGCCGGCGGTCGCCAAGCTGTTCT
CGCAAAACAGCCGCGATGCGAGCAACTCGGTGCTCTACAAGGAACGCGTCGACGGGCGCGGCGCCATCCAGGCGGCCGGC
GCCAACTCGCCGGCAGGCCTGTCGATGATCTCGCCGCGAAAGCAGGTCCAGGACGATCTTGCCAAGTGGCAAATGAACGA
GGCTGGTGATCCGGAGGTGCAGGCGGACAGCCGCAGCAAGGCGTTCTTCAACGGCAAGATCTTCAAGATCTCGACGCCGA
TGGTATCGCCGGGCTGCAAGATCACGTCGAACTATCAGGAAGGGACGCAGGAGACCTACCATGTCCCCTGTCCGCACTGC
CAAGAGCTGCAGGAGCTGCGCTGGGAGAACATGCGGGATCACATCGATCCCGAGCATCCCGAGCAGGCGCATTTCGTCTG
CATCCATTGCGGCTGCGAGATCCACGAGCACCATCGCGAATGGATGGTGAAGCCGGAAAACGGCGCGAAGTGGGTTGCCA
AATATCCGGAGCGCGGCCGCCGCCATCGATCGTTCCGCATCTGGATGGCCTATTCGCCTTTCGAGCGCTGGGAGAACCTG
GCGCGCGAGTGGCTGACGGTCCAGGCCGGTGGCCCGGAGAACCGGGAAAAGGGTTCTGGCGCCGAGCAGACGTTCTGGAA
TGACTGGCTCGGGCTCGCCTTCGAGGCGGACAACAAGGCGATCGACTGGGAAGTGCTCCGCGATCGCGCCGAGGACCACG
GTTTCCAGCGCGGTGTCATCCCGGCCGAGGCGCTGGCGCTGGTGCTCGGCATGGACGTGCAGGGCGACCGCGTCGAGTGG
CTGCTGGTCGGCTACGGCAGGAATCGGTACCGGGCCGTCATCGACCACGGCGTCGTCGACCATCGCGCCGGCAGCCACCT
GGCGGACGCCAAGGAACATTCCGGCCATATCTCCGAGCCGGAGGTTCGCACCGCCCTCGATCGGCTGCTGCAGCGCGAAT
GGCTCGACGATGCCGGCCGCAAGCGAACCGCCGACCGCGTCGCCATCGACGGCAACGCCTATACCGACGACGTCTGGAAC
TGGGTTCGCAAGCATCCGAAGTCGCGCGTCATCATGGTGCGCGGCGGCAATACGGAAGCCGCGCCGCCGATCGTGCAGAC
GAAAGAGTATGACCGGAAGGGCAAGCCGAAGAAGCAGAAGTGGTCCTCCCGCTTCTTCACCTTCAACGCCTCGGCCTTCA
AGATCCGGCTCTACCGGGACTACAAGAAAGACGATCCGGAGCAGGCGGGCTATATCCGTTTCGCCCGCGGCTTCGGCGAC
GATTTCTACCAGCAGGCGACATCGGAAGCCCGGGTACCGGAGAAGACCCGGAGCGGTCACACCCGCTACGTCTGGAAACT
CGGCGAGGGCAAGCGCAACGAAATCATCGACATGCTCAACCAGAGCCTGGCCGGTGCCTATCGCTGGGGCGTGCCCTACT
GGACCGACGAGGAATGGGACGCGATCGCCGATCGCCTCGGCCGCCTCGAAGCGCCGCAACAGGGCGATCTCGAGGATCAT
CTGAACCAGATCGCCGTCAAGACCGAACCTGCCGCAGGCCAAAGCGCCGCGGCAGAACAGCAATCGCCGCTCGTCGCCGC
CGCCCTCGCGCGCGCCGCCCGGGCAGCGCAGCGAAACCGCTAG

Upstream 100 bases:

>100_bases
ATGTGCTGCTGAAGTCCTTTCGGGACCACCGAGCCAAGAAGGCGCGCGACTTCGCCGACGCAGCGGCCGAGTTGGAGGAG
CATGTCGAGGACGAGCAGCA

Downstream 100 bases:

>100_bases
GAACATCCATATGGCACTGACCGAACAGGAACGCGCCGTGCTTCTGGCACGGCTCGACGAAGCACGTGAGGCCTTGCACC
AGATGGAGCTTGGCCGCGCC

Product: phage terminase GpA

Products: NA

Alternate protein names: Phage Terminase Large Subunit; Terminase GpA; Terminase Large Subunit; Bacteriophage Tail Assembly Protein; Prophage LambdaW1 Terminase Large Subunit; Bacteriophage Tail Assembly Protein-Like Protein; Phage-Related Terminase Large Subunit; Prophage; Bacteriophage Terminase Large Subunit; Large Subunit Of DNA Packaging Dimer; Terminase Gpa; DNA Packaging Protein; DNA Packaging Protein Of Prophage

Number of amino acids: Translated: 680; Mature: 679

Protein sequence:

>680_residues
MTVLFNPERLALSVLAEICEPPPAVDYLDWAKRNIVFSERITDHPGPYNEDLVPFFSEILRALSPEDPCNIVSLAKSAQI
GGTICANIFTLGSLDMAPGDFLYVHPTEENAARWSKTKLMPLVREMPAVAKLFSQNSRDASNSVLYKERVDGRGAIQAAG
ANSPAGLSMISPRKQVQDDLAKWQMNEAGDPEVQADSRSKAFFNGKIFKISTPMVSPGCKITSNYQEGTQETYHVPCPHC
QELQELRWENMRDHIDPEHPEQAHFVCIHCGCEIHEHHREWMVKPENGAKWVAKYPERGRRHRSFRIWMAYSPFERWENL
AREWLTVQAGGPENREKGSGAEQTFWNDWLGLAFEADNKAIDWEVLRDRAEDHGFQRGVIPAEALALVLGMDVQGDRVEW
LLVGYGRNRYRAVIDHGVVDHRAGSHLADAKEHSGHISEPEVRTALDRLLQREWLDDAGRKRTADRVAIDGNAYTDDVWN
WVRKHPKSRVIMVRGGNTEAAPPIVQTKEYDRKGKPKKQKWSSRFFTFNASAFKIRLYRDYKKDDPEQAGYIRFARGFGD
DFYQQATSEARVPEKTRSGHTRYVWKLGEGKRNEIIDMLNQSLAGAYRWGVPYWTDEEWDAIADRLGRLEAPQQGDLEDH
LNQIAVKTEPAAGQSAAAEQQSPLVAAALARAARAAQRNR

Sequences:

>Translated_680_residues
MTVLFNPERLALSVLAEICEPPPAVDYLDWAKRNIVFSERITDHPGPYNEDLVPFFSEILRALSPEDPCNIVSLAKSAQI
GGTICANIFTLGSLDMAPGDFLYVHPTEENAARWSKTKLMPLVREMPAVAKLFSQNSRDASNSVLYKERVDGRGAIQAAG
ANSPAGLSMISPRKQVQDDLAKWQMNEAGDPEVQADSRSKAFFNGKIFKISTPMVSPGCKITSNYQEGTQETYHVPCPHC
QELQELRWENMRDHIDPEHPEQAHFVCIHCGCEIHEHHREWMVKPENGAKWVAKYPERGRRHRSFRIWMAYSPFERWENL
AREWLTVQAGGPENREKGSGAEQTFWNDWLGLAFEADNKAIDWEVLRDRAEDHGFQRGVIPAEALALVLGMDVQGDRVEW
LLVGYGRNRYRAVIDHGVVDHRAGSHLADAKEHSGHISEPEVRTALDRLLQREWLDDAGRKRTADRVAIDGNAYTDDVWN
WVRKHPKSRVIMVRGGNTEAAPPIVQTKEYDRKGKPKKQKWSSRFFTFNASAFKIRLYRDYKKDDPEQAGYIRFARGFGD
DFYQQATSEARVPEKTRSGHTRYVWKLGEGKRNEIIDMLNQSLAGAYRWGVPYWTDEEWDAIADRLGRLEAPQQGDLEDH
LNQIAVKTEPAAGQSAAAEQQSPLVAAALARAARAAQRNR
>Mature_679_residues
TVLFNPERLALSVLAEICEPPPAVDYLDWAKRNIVFSERITDHPGPYNEDLVPFFSEILRALSPEDPCNIVSLAKSAQIG
GTICANIFTLGSLDMAPGDFLYVHPTEENAARWSKTKLMPLVREMPAVAKLFSQNSRDASNSVLYKERVDGRGAIQAAGA
NSPAGLSMISPRKQVQDDLAKWQMNEAGDPEVQADSRSKAFFNGKIFKISTPMVSPGCKITSNYQEGTQETYHVPCPHCQ
ELQELRWENMRDHIDPEHPEQAHFVCIHCGCEIHEHHREWMVKPENGAKWVAKYPERGRRHRSFRIWMAYSPFERWENLA
REWLTVQAGGPENREKGSGAEQTFWNDWLGLAFEADNKAIDWEVLRDRAEDHGFQRGVIPAEALALVLGMDVQGDRVEWL
LVGYGRNRYRAVIDHGVVDHRAGSHLADAKEHSGHISEPEVRTALDRLLQREWLDDAGRKRTADRVAIDGNAYTDDVWNW
VRKHPKSRVIMVRGGNTEAAPPIVQTKEYDRKGKPKKQKWSSRFFTFNASAFKIRLYRDYKKDDPEQAGYIRFARGFGDD
FYQQATSEARVPEKTRSGHTRYVWKLGEGKRNEIIDMLNQSLAGAYRWGVPYWTDEEWDAIADRLGRLEAPQQGDLEDHL
NQIAVKTEPAAGQSAAAEQQSPLVAAALARAARAAQRNR

Specific function: Unknown

COG id: COG5525

COG function: function code R; Bacteriophage tail assembly protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77193; Mature: 77062

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLFNPERLALSVLAEICEPPPAVDYLDWAKRNIVFSERITDHPGPYNEDLVPFFSEIL
CEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHCEEEEHHCCCCCCCCCCCHHHHHHHHH
RALSPEDPCNIVSLAKSAQIGGTICANIFTLGSLDMAPGDFLYVHPTEENAARWSKTKLM
HHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHH
PLVREMPAVAKLFSQNSRDASNSVLYKERVDGRGAIQAAGANSPAGLSMISPRKQVQDDL
HHHHHHHHHHHHHCCCCCCCCCCEEEHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHH
AKWQMNEAGDPEVQADSRSKAFFNGKIFKISTPMVSPGCKITSNYQEGTQETYHVPCPHC
HHHCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCEECCHHCCCCCEEECCCCCH
QELQELRWENMRDHIDPEHPEQAHFVCIHCGCEIHEHHREWMVKPENGAKWVAKYPERGR
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCEECCCCCCHHHHHCCHHCC
RHRSFRIWMAYSPFERWENLAREWLTVQAGGPENREKGSGAEQTFWNDWLGLAFEADNKA
CCCEEEEEEEECHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHCEEEECCCCC
IDWEVLRDRAEDHGFQRGVIPAEALALVLGMDVQGDRVEWLLVGYGRNRYRAVIDHGVVD
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHCCCHH
HRAGSHLADAKEHSGHISEPEVRTALDRLLQREWLDDAGRKRTADRVAIDGNAYTDDVWN
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
WVRKHPKSRVIMVRGGNTEAAPPIVQTKEYDRKGKPKKQKWSSRFFTFNASAFKIRLYRD
HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCEEEEEEEEC
YKKDDPEQAGYIRFARGFGDDFYQQATSEARVPEKTRSGHTRYVWKLGEGKRNEIIDMLN
CCCCCCCCCCEEEEEHHCCHHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCHHHHHHHHH
QSLAGAYRWGVPYWTDEEWDAIADRLGRLEAPQQGDLEDHLNQIAVKTEPAAGQSAAAEQ
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHEEEECCCCCCCCHHHHH
QSPLVAAALARAARAAQRNR
CCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVLFNPERLALSVLAEICEPPPAVDYLDWAKRNIVFSERITDHPGPYNEDLVPFFSEIL
EEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHCEEEEHHCCCCCCCCCCCHHHHHHHHH
RALSPEDPCNIVSLAKSAQIGGTICANIFTLGSLDMAPGDFLYVHPTEENAARWSKTKLM
HHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHH
PLVREMPAVAKLFSQNSRDASNSVLYKERVDGRGAIQAAGANSPAGLSMISPRKQVQDDL
HHHHHHHHHHHHHCCCCCCCCCCEEEHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHH
AKWQMNEAGDPEVQADSRSKAFFNGKIFKISTPMVSPGCKITSNYQEGTQETYHVPCPHC
HHHCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCEECCHHCCCCCEEECCCCCH
QELQELRWENMRDHIDPEHPEQAHFVCIHCGCEIHEHHREWMVKPENGAKWVAKYPERGR
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCEECCCCCCHHHHHCCHHCC
RHRSFRIWMAYSPFERWENLAREWLTVQAGGPENREKGSGAEQTFWNDWLGLAFEADNKA
CCCEEEEEEEECHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHCEEEECCCCC
IDWEVLRDRAEDHGFQRGVIPAEALALVLGMDVQGDRVEWLLVGYGRNRYRAVIDHGVVD
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHCCCHH
HRAGSHLADAKEHSGHISEPEVRTALDRLLQREWLDDAGRKRTADRVAIDGNAYTDDVWN
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
WVRKHPKSRVIMVRGGNTEAAPPIVQTKEYDRKGKPKKQKWSSRFFTFNASAFKIRLYRD
HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCEEEEEEEEC
YKKDDPEQAGYIRFARGFGDDFYQQATSEARVPEKTRSGHTRYVWKLGEGKRNEIIDMLN
CCCCCCCCCCEEEEEHHCCHHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCHHHHHHHHH
QSLAGAYRWGVPYWTDEEWDAIADRLGRLEAPQQGDLEDHLNQIAVKTEPAAGQSAAAEQ
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHEEEECCCCCCCCHHHHH
QSPLVAAALARAARAAQRNR
CCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA