Click here to switch to the map view.

The map label for this gene is 150396853

Identifier: 150396853

GI number: 150396853

Start: 1742060

End: 1742440

Strand: Reverse

Name: 150396853

Synonym: Smed_1648

Alternate gene names: NA

Gene position: 1742440-1742060 (Counterclockwise)

Preceding gene: 150396854

Following gene: 150396852

Centisome position: 46.07

GC content: 66.4

Gene sequence:

>381_bases
ATGTTGCCTGCCAATCCATTGCGCGGCGAGGCGGAGGTTCGCATCGGTGCGATCGACTTCCGCATCGCCGTCACTTTCTC
CGGGCTCGCTCGTCTCTCCGATGCGATCGGCGCCCGCACCCTCGACGAGCTTTACGGCCGTCTCCTCGGCTTCGAGCCGA
AGGCGGTTGCCTGCGCCGTCCGCTGCCTGATCGTCGCGGATGACGAGGATCATATATCGGCGCTTTCCGCGAAGATCCTC
GACGACGGCAATATCTCGGCCGCCGACCAGCTCGCCTGGCGCGAGGCGGTCGAGAAGGCGCTGTCGGCTCACATTGCTGC
CGGGACAGTGCGGCGGGACGAGCGGACGGCTTCGCAGATTGCGGGAGACGCCGTCCTGTGA

Upstream 100 bases:

>100_bases
GACCTTCTCCGGCGACAAGACCAACGAGCTGCAGGCCGACATCCGTTGCGCCATGACCGGCGCTCTTACCTTCGTGCCGG
CTGTCTAAGCGGAGAGTTCC

Downstream 100 bases:

>100_bases
AAGCCCGTAAGCCCCTCCTGATCAAGGATCATCTCAAGTCGCTCTACCGGATCGCCACCAACCCGAAGATGCTCGGCTGG
TCGCCGGAAATGTTCTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MLPANPLRGEAEVRIGAIDFRIAVTFSGLARLSDAIGARTLDELYGRLLGFEPKAVACAVRCLIVADDEDHISALSAKIL
DDGNISAADQLAWREAVEKALSAHIAAGTVRRDERTASQIAGDAVL

Sequences:

>Translated_126_residues
MLPANPLRGEAEVRIGAIDFRIAVTFSGLARLSDAIGARTLDELYGRLLGFEPKAVACAVRCLIVADDEDHISALSAKIL
DDGNISAADQLAWREAVEKALSAHIAAGTVRRDERTASQIAGDAVL
>Mature_126_residues
MLPANPLRGEAEVRIGAIDFRIAVTFSGLARLSDAIGARTLDELYGRLLGFEPKAVACAVRCLIVADDEDHISALSAKIL
DDGNISAADQLAWREAVEKALSAHIAAGTVRRDERTASQIAGDAVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13340; Mature: 13340

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPANPLRGEAEVRIGAIDFRIAVTFSGLARLSDAIGARTLDELYGRLLGFEPKAVACAV
CCCCCCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHH
RCLIVADDEDHISALSAKILDDGNISAADQLAWREAVEKALSAHIAAGTVRRDERTASQI
EEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AGDAVL
CCCCCC
>Mature Secondary Structure
MLPANPLRGEAEVRIGAIDFRIAVTFSGLARLSDAIGARTLDELYGRLLGFEPKAVACAV
CCCCCCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHH
RCLIVADDEDHISALSAKILDDGNISAADQLAWREAVEKALSAHIAAGTVRRDERTASQI
EEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AGDAVL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA