| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cgmA [H]
Identifier: 150396776
GI number: 150396776
Start: 1662853
End: 1664790
Strand: Direct
Name: cgmA [H]
Synonym: Smed_1567
Alternate gene names: 150396776
Gene position: 1662853-1664790 (Clockwise)
Preceding gene: 150396771
Following gene: 150396777
Centisome position: 43.97
GC content: 58.36
Gene sequence:
>1938_bases ATGAAATTGGAGACGCCGTTGGCCCGTATCGATTCCGCCGTGAGCAGCTCTGACGTCTACGCCAATGGGCAAGTCTCTTC CGCAAGATACGCCAGAACCCTGTCGAGCGCCCGCAGCGCCCTATTCACGCTTCTGCTCGCGATCTCGGTCGTCTTCACCA TCGAACTTATCGTGCGCTGGTCGTGGCCCGACACCGTCGCCTATTTTACCGATCCCATGCGGCCGGCCTGGACCACGGTT GCCGTCTTCTTCCTCGCAATGCTCGGCGTCGATGCCCTGTTCGGCCGGGAACACAAGGCAGCACTGCTCGTTGCGCCGCT TGCCGTGGTACCCGCCTTCATCAGTCAGCAGAAGCAGGTCTTCCTGTCCGATCCACTCTACCCGACCGATTTCCTCTTTG GCCGGCAGATCATGGAACTGATGCCGGTTCTCGTAAAGGATAGGCCCTGGACTGCCGTCGGCGTCGTGGCCGGAATCATA ATCGCGATCGTCGTTTCCGTCCTCCTTCTGCGATTTGCCTGGCGGAACTTCCCCAAGCTGACCCGCCGTGAACGTATGGC GCGCATCGCATTTGCCTTGCCGTTGCTGGTAGCGTTCTGGAACATCATGGACTACAACCAGTTCTCCTGGATTCGTGACC GGCTGCGGGTCATCCCCATCATGTGGGACCAGACCGAGAACTATCGCCACAACGGCTTTGCCCTGGCTTTCGCCATCAAC CTCCCCATGGCCAATGTAAGCGCGCCGGCTGGCTACATGGCGGATGCGATCGAGCGGATTCCGGTCAAGCCGCTTCCCGC CGGTACGAGCCATCGCGGCAAGCCGGACGTGATCGTGCTCATGAGCGAATCCTTCTGGGACCCCACCCGTCTTCCCAAGG TGAAGCTGACACCCGATCCCATGCCGACGATCCGCGAACTGCAGGGCGGCAACGTATTTTCTCCGGAGTTCGGTGGCATG ACAGCCAATGTCGAATTCGAGGCGGTGACGGGTTTTTCCAACGCGTTCCTTCCCTATGGCAGCATTCCCTACCAGCAATA TATACGAAATCCGATCCCCTCGCTTGCCACCTTCTTCCGCAGTGAAGGTTACGTCTCACGCGCCATTCATCCTTTTCAGG GATGGTTCTGGAACCGCAATGCCGTCTACAAAGCCTTCGGTTTCGATATGTTCAAGTCGGAGGAGAACATGCCGCCGATG GCCAAGCGTGGCATCTTCGCCTCTGACGAGTCGTTGACGAAGGAGATCATCCGCCAGGCAGACGAGCTGGAAGACCCTTT CTTCTTCTTCGCCGTAACCCTGCAGGGCCATGGTCCCTATGAGGCCAACCGATACGCGAAGAACACGATCAAGGTCGAAG GCGAGCTCTCCGACGCCGATCGTCAGGTACTTGCGACCTATGCTCAAGGCGTGAAGGAAGCCGATGACAGCCTCAAGATG CTGATGGACTGGGCGAAAGAACGGGACCGGGAGACGATCATCGTTCTCTTCGGCGATCACCTGCCGCCGCTGAACACCGT CTATTCCAGCACCGGCTACATGAAGGGAATCACGGCCGAGCGGAAGGGACCGAAGGATCAGATGAAGGCCGAGCACGAAA CACCGCTCGTCGTCTGGTCGAACAAGACAGGTCCGAAAAAGAAGATCGGCACGATCAGCCCGGCCTTTCTTTCCTATCAG ATTCTGAAGCAGGCCGGATATGAGCACCCCTACTACACCGGTTTCCTTGGAAAGGTTTATGATCACTACCGCGTCCTCGA CCGTTACATGCTGATCCGCAAGAACGGCAAGGATGTCGCCGACTGGCTCCGCCAACGGAAGATACCGGCATCGTTGCGTG ACTACCGCTTCCTGCAGCACGACATGATGTTCGGCAAGCGCTACAGCACCGAGCGCTTCTTCCAGTCCCACGCCGATCTC TACAGCGCCGGTTTGTAA
Upstream 100 bases:
>100_bases AAATCTTTCACGGCTCCGGGAACCCGGCGACGACGGCGCCGTTTCCGCCATTCATCCTCTGTTCAAGATGACACCCGTAT GACGGTAGAGTGAAATATTT
Downstream 100 bases:
>100_bases ACGATCCGTCGAATCCGACAGCTTGTTCCGTGTAGATACAAGGAGGGATCTGAGATGGCGCAGCGATATCCTTTCGCCTG TATCTGAGCTCCCGTGCCGG
Product: sulfatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 645; Mature: 645
Protein sequence:
>645_residues MKLETPLARIDSAVSSSDVYANGQVSSARYARTLSSARSALFTLLLAISVVFTIELIVRWSWPDTVAYFTDPMRPAWTTV AVFFLAMLGVDALFGREHKAALLVAPLAVVPAFISQQKQVFLSDPLYPTDFLFGRQIMELMPVLVKDRPWTAVGVVAGII IAIVVSVLLLRFAWRNFPKLTRRERMARIAFALPLLVAFWNIMDYNQFSWIRDRLRVIPIMWDQTENYRHNGFALAFAIN LPMANVSAPAGYMADAIERIPVKPLPAGTSHRGKPDVIVLMSESFWDPTRLPKVKLTPDPMPTIRELQGGNVFSPEFGGM TANVEFEAVTGFSNAFLPYGSIPYQQYIRNPIPSLATFFRSEGYVSRAIHPFQGWFWNRNAVYKAFGFDMFKSEENMPPM AKRGIFASDESLTKEIIRQADELEDPFFFFAVTLQGHGPYEANRYAKNTIKVEGELSDADRQVLATYAQGVKEADDSLKM LMDWAKERDRETIIVLFGDHLPPLNTVYSSTGYMKGITAERKGPKDQMKAEHETPLVVWSNKTGPKKKIGTISPAFLSYQ ILKQAGYEHPYYTGFLGKVYDHYRVLDRYMLIRKNGKDVADWLRQRKIPASLRDYRFLQHDMMFGKRYSTERFFQSHADL YSAGL
Sequences:
>Translated_645_residues MKLETPLARIDSAVSSSDVYANGQVSSARYARTLSSARSALFTLLLAISVVFTIELIVRWSWPDTVAYFTDPMRPAWTTV AVFFLAMLGVDALFGREHKAALLVAPLAVVPAFISQQKQVFLSDPLYPTDFLFGRQIMELMPVLVKDRPWTAVGVVAGII IAIVVSVLLLRFAWRNFPKLTRRERMARIAFALPLLVAFWNIMDYNQFSWIRDRLRVIPIMWDQTENYRHNGFALAFAIN LPMANVSAPAGYMADAIERIPVKPLPAGTSHRGKPDVIVLMSESFWDPTRLPKVKLTPDPMPTIRELQGGNVFSPEFGGM TANVEFEAVTGFSNAFLPYGSIPYQQYIRNPIPSLATFFRSEGYVSRAIHPFQGWFWNRNAVYKAFGFDMFKSEENMPPM AKRGIFASDESLTKEIIRQADELEDPFFFFAVTLQGHGPYEANRYAKNTIKVEGELSDADRQVLATYAQGVKEADDSLKM LMDWAKERDRETIIVLFGDHLPPLNTVYSSTGYMKGITAERKGPKDQMKAEHETPLVVWSNKTGPKKKIGTISPAFLSYQ ILKQAGYEHPYYTGFLGKVYDHYRVLDRYMLIRKNGKDVADWLRQRKIPASLRDYRFLQHDMMFGKRYSTERFFQSHADL YSAGL >Mature_645_residues MKLETPLARIDSAVSSSDVYANGQVSSARYARTLSSARSALFTLLLAISVVFTIELIVRWSWPDTVAYFTDPMRPAWTTV AVFFLAMLGVDALFGREHKAALLVAPLAVVPAFISQQKQVFLSDPLYPTDFLFGRQIMELMPVLVKDRPWTAVGVVAGII IAIVVSVLLLRFAWRNFPKLTRRERMARIAFALPLLVAFWNIMDYNQFSWIRDRLRVIPIMWDQTENYRHNGFALAFAIN LPMANVSAPAGYMADAIERIPVKPLPAGTSHRGKPDVIVLMSESFWDPTRLPKVKLTPDPMPTIRELQGGNVFSPEFGGM TANVEFEAVTGFSNAFLPYGSIPYQQYIRNPIPSLATFFRSEGYVSRAIHPFQGWFWNRNAVYKAFGFDMFKSEENMPPM AKRGIFASDESLTKEIIRQADELEDPFFFFAVTLQGHGPYEANRYAKNTIKVEGELSDADRQVLATYAQGVKEADDSLKM LMDWAKERDRETIIVLFGDHLPPLNTVYSSTGYMKGITAERKGPKDQMKAEHETPLVVWSNKTGPKKKIGTISPAFLSYQ ILKQAGYEHPYYTGFLGKVYDHYRVLDRYMLIRKNGKDVADWLRQRKIPASLRDYRFLQHDMMFGKRYSTERFFQSHADL YSAGL
Specific function: Unknown
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 73401; Mature: 73401
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLETPLARIDSAVSSSDVYANGQVSSARYARTLSSARSALFTLLLAISVVFTIELIVRW CCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE SWPDTVAYFTDPMRPAWTTVAVFFLAMLGVDALFGREHKAALLVAPLAVVPAFISQQKQV CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCE FLSDPLYPTDFLFGRQIMELMPVLVKDRPWTAVGVVAGIIIAIVVSVLLLRFAWRNFPKL EECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH TRRERMARIAFALPLLVAFWNIMDYNQFSWIRDRLRVIPIMWDQTENYRHNGFALAFAIN HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEEE LPMANVSAPAGYMADAIERIPVKPLPAGTSHRGKPDVIVLMSESFWDPTRLPKVKLTPDP CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCC MPTIRELQGGNVFSPEFGGMTANVEFEAVTGFSNAFLPYGSIPYQQYIRNPIPSLATFFR CCHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCHHHHHHHHH SEGYVSRAIHPFQGWFWNRNAVYKAFGFDMFKSEENMPPMAKRGIFASDESLTKEIIRQA CCCCHHHCCCHHHCEEECCCCCHHHHCCHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHH DELEDPFFFFAVTLQGHGPYEANRYAKNTIKVEGELSDADRQVLATYAQGVKEADDSLKM HHCCCCEEEEEEEEECCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH LMDWAKERDRETIIVLFGDHLPPLNTVYSSTGYMKGITAERKGPKDQMKAEHETPLVVWS HHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCEECCCCCCCCCHHHHCCCCCCCEEEEC NKTGPKKKIGTISPAFLSYQILKQAGYEHPYYTGFLGKVYDHYRVLDRYMLIRKNGKDVA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH DWLRQRKIPASLRDYRFLQHDMMFGKRYSTERFFQSHADLYSAGL HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLETPLARIDSAVSSSDVYANGQVSSARYARTLSSARSALFTLLLAISVVFTIELIVRW CCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE SWPDTVAYFTDPMRPAWTTVAVFFLAMLGVDALFGREHKAALLVAPLAVVPAFISQQKQV CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCE FLSDPLYPTDFLFGRQIMELMPVLVKDRPWTAVGVVAGIIIAIVVSVLLLRFAWRNFPKL EECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH TRRERMARIAFALPLLVAFWNIMDYNQFSWIRDRLRVIPIMWDQTENYRHNGFALAFAIN HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEEE LPMANVSAPAGYMADAIERIPVKPLPAGTSHRGKPDVIVLMSESFWDPTRLPKVKLTPDP CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCC MPTIRELQGGNVFSPEFGGMTANVEFEAVTGFSNAFLPYGSIPYQQYIRNPIPSLATFFR CCHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCHHHHHHHHH SEGYVSRAIHPFQGWFWNRNAVYKAFGFDMFKSEENMPPMAKRGIFASDESLTKEIIRQA CCCCHHHCCCHHHCEEECCCCCHHHHCCHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHH DELEDPFFFFAVTLQGHGPYEANRYAKNTIKVEGELSDADRQVLATYAQGVKEADDSLKM HHCCCCEEEEEEEEECCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH LMDWAKERDRETIIVLFGDHLPPLNTVYSSTGYMKGITAERKGPKDQMKAEHETPLVVWS HHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCEECCCCCCCCCHHHHCCCCCCCEEEEC NKTGPKKKIGTISPAFLSYQILKQAGYEHPYYTGFLGKVYDHYRVLDRYMLIRKNGKDVA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH DWLRQRKIPASLRDYRFLQHDMMFGKRYSTERFFQSHADLYSAGL HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10419956; 11481430 [H]