| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is purL [H]
Identifier: 150396717
GI number: 150396717
Start: 1586239
End: 1588470
Strand: Direct
Name: purL [H]
Synonym: Smed_1505
Alternate gene names: 150396717
Gene position: 1586239-1588470 (Clockwise)
Preceding gene: 150396716
Following gene: 150396718
Centisome position: 41.94
GC content: 62.77
Gene sequence:
>2232_bases ATGACGATTTCCAACACCCGCCCCATCACCCCGGACCTGATCGCTTCGCACGGGCTCAAGCCTGACGAATACGAACGCAT TCTGAACCTGATCGGGCGCGAGCCGACCTTTACGGAGCTCGGCATCTTCTCGGCAATGTGGAACGAGCATTGCTCATACA AATCCTCGAAGAAATGGCTGCGCACGCTTCCGACCAAGGGGCCGCGCGTCATCCAGGGACCCGGTGAGAACGCCGGCGTG GTCGACATCGACGACGGGGATTGCGTCGTATTCAAGATGGAAAGCCACAACCACCCCTCCTACATCGAACCCTACCAGGG CGCAGCTACGGGCGTCGGCGGCATACTGCGTGACGTCTTCACCATGGGTGCGCGTCCCATTGCGGCGATGAACGCGCTGC GTTTCGGTTCTCCGGATCACCCGAAGACCCGGCACCTCGTCTCCGGGGTCGTAGCTGGCGTCGGCGGTTACGGCAATTCC TTCGGCGTGCCGACCGTCGGCGGCGAAGTCGAGTTCGACGCGCGCTATAACGGCAACATTCTCGTCAATGCCTTCGCGGC AGGCCTCGCCAAAACAGATGCGATCTTCTATTCCAAGGCGGAAGGCGTCGGCCTCCCCGTCGTCTATCTCGGTGCAAAGA CCGGCCGCGACGGCGTCGGCGGTGCGACCATGGCATCTGCCGAGTTCGATGAATCGATCGAAGAAAAGCGCCCGACCGTT CAAGTCGGCGATCCCTTTACAGAGAAGTGCCTGCTCGAGGCCTGCCTGGAGTTGATGCAGACCGGCGCGGTCATCGCGAT CCAGGACATGGGCGCGGCCGGCCTCACCTGCTCGGCCGTCGAAATGGGCGCCAAGGGCGATCTCGGCATCGAGCTCGATC TCGACAAGGTGCCGGTGCGCGAAGAGCGCATGACCGCTTACGAGATGATGCTTTCCGAAAGCCAGGAGCGCATGCTCATG GTGCTGCGCCCGGAGAAGGAAGAGGAAGCCAAGGCGATCTTCGTCAAATGGGGCCTCGATTTCGCAATCGTCGGCAAGAC CACCGACGACCTGCGTTTCCGTATCCTGCATCAGGGCGAAGAAGTGGCGAACCTGCCGATCAAGGAACTCGGCGACGAGG CACCGGAATATGATCGGCCCTGGACGCCGGCCAAGGTGCCCTCGCCGCTCGCCACCAATGACATCCCGCAGGCTGATGTC GCCGATACACTCTTGCAACTCGTCGGCTCCGCCAACAATTCCTCGCGCCGCTGGGTTTATGAGCAGTATGACACGCTGAT CCAGGGCAATTCGCTGCAGCTTCCGGGGGGCGACGCCGGCGTGGTTCGCGTCGAGGGCCATGAGGCCAAGGCGCTTGCAT TCTCTTCGGACGTGACGCCGCGCTATGTCGAAGCCGATCCGTTCGAGGGTGGCAAGCAGGCAGTCGCCGAATGCTGGCGC AACCTGACCGCGACCGGCGCGCTGCCGCTCGCCGCAACCGACAATCTCAACTTCGGCAACCCCGAGCGTCCCGAGATCAT GAGCCAGCTCGTCCATGCGATCAAAGGCATAGGTGAAGCCTGCCAGGCGCTCGACTTTCCGATCGTCTCCGGAAACGTGT CGCTTTATAACGAGACCAACGGACAGGCTATCCTGCCGACCCCCACGATCGGCGGCGTCGGCCTCGTCCGCGACTGGTCG AAAATGGCGCGGATACGCTTTGCTGTTGCGGACGAAACCATCCTTCTTGCCGGCGCTCCAAAAAGCTGGGGAACACACAT TGGCCAGTCCGTCTACATGCGCGACATTCACGGCCGCACGGATGGTCCGGCGCCGCATGTCGACCTCGCCCATGAACGCA AGGTCGGCGATTTCGTTCGCGGGCTGATCGGCGACGGTCTGGTCACGGCCGTCCACGACTGCTCGTCGGGCGGACTTGCA CTGGCCGTGGCCGAGATGGCCATGGCTTCCGGCATCGGCGCGACGATCGCGGCACCGGCGGAGCACGACGCGATTCCGGT CTTCTACGGCGAGGATCAAGGTCGCTATGTCGTAACCGTCGCAAATGGCGCGGTCGAGACGGTGGCTGCTCGGGCAAAAG CCGCCGGAGTTGCGCTGCCGGTAATTGGCAGGACCGGCGGAGATGCGGTGAAGCTCGGGGATGCAAGACCCGTTTCGGTA AACGCCTTGCGTTCCGCGCATGAAGCGTGGTTCCCCAATTATATGGGCGGCGATCTTGCGCCGGACAATTGA
Upstream 100 bases:
>100_bases CTGTTGATCGCCCGTATTTTTCTGTCGCACCATGCCGCGGCATAGGCTAAAGAAGCCGCAAAGTGCCCTATAGCGCCGCG CGAAGGATTGACGGTCGACG
Downstream 100 bases:
>100_bases TCCGCCGACCGGGCGGACGGCGGAAACAGCATTTGCGTTCGGCCCCTGAATCGTGTTTCCCTTGGGACCATAGCGAGCGG CAGCAATGTTGCCGCCCCAA
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II [H]
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MTISNTRPITPDLIASHGLKPDEYERILNLIGREPTFTELGIFSAMWNEHCSYKSSKKWLRTLPTKGPRVIQGPGENAGV VDIDDGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPIAAMNALRFGSPDHPKTRHLVSGVVAGVGGYGNS FGVPTVGGEVEFDARYNGNILVNAFAAGLAKTDAIFYSKAEGVGLPVVYLGAKTGRDGVGGATMASAEFDESIEEKRPTV QVGDPFTEKCLLEACLELMQTGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLDKVPVREERMTAYEMMLSESQERMLM VLRPEKEEEAKAIFVKWGLDFAIVGKTTDDLRFRILHQGEEVANLPIKELGDEAPEYDRPWTPAKVPSPLATNDIPQADV ADTLLQLVGSANNSSRRWVYEQYDTLIQGNSLQLPGGDAGVVRVEGHEAKALAFSSDVTPRYVEADPFEGGKQAVAECWR NLTATGALPLAATDNLNFGNPERPEIMSQLVHAIKGIGEACQALDFPIVSGNVSLYNETNGQAILPTPTIGGVGLVRDWS KMARIRFAVADETILLAGAPKSWGTHIGQSVYMRDIHGRTDGPAPHVDLAHERKVGDFVRGLIGDGLVTAVHDCSSGGLA LAVAEMAMASGIGATIAAPAEHDAIPVFYGEDQGRYVVTVANGAVETVAARAKAAGVALPVIGRTGGDAVKLGDARPVSV NALRSAHEAWFPNYMGGDLAPDN
Sequences:
>Translated_743_residues MTISNTRPITPDLIASHGLKPDEYERILNLIGREPTFTELGIFSAMWNEHCSYKSSKKWLRTLPTKGPRVIQGPGENAGV VDIDDGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPIAAMNALRFGSPDHPKTRHLVSGVVAGVGGYGNS FGVPTVGGEVEFDARYNGNILVNAFAAGLAKTDAIFYSKAEGVGLPVVYLGAKTGRDGVGGATMASAEFDESIEEKRPTV QVGDPFTEKCLLEACLELMQTGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLDKVPVREERMTAYEMMLSESQERMLM VLRPEKEEEAKAIFVKWGLDFAIVGKTTDDLRFRILHQGEEVANLPIKELGDEAPEYDRPWTPAKVPSPLATNDIPQADV ADTLLQLVGSANNSSRRWVYEQYDTLIQGNSLQLPGGDAGVVRVEGHEAKALAFSSDVTPRYVEADPFEGGKQAVAECWR NLTATGALPLAATDNLNFGNPERPEIMSQLVHAIKGIGEACQALDFPIVSGNVSLYNETNGQAILPTPTIGGVGLVRDWS KMARIRFAVADETILLAGAPKSWGTHIGQSVYMRDIHGRTDGPAPHVDLAHERKVGDFVRGLIGDGLVTAVHDCSSGGLA LAVAEMAMASGIGATIAAPAEHDAIPVFYGEDQGRYVVTVANGAVETVAARAKAAGVALPVIGRTGGDAVKLGDARPVSV NALRSAHEAWFPNYMGGDLAPDN >Mature_742_residues TISNTRPITPDLIASHGLKPDEYERILNLIGREPTFTELGIFSAMWNEHCSYKSSKKWLRTLPTKGPRVIQGPGENAGVV DIDDGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPIAAMNALRFGSPDHPKTRHLVSGVVAGVGGYGNSF GVPTVGGEVEFDARYNGNILVNAFAAGLAKTDAIFYSKAEGVGLPVVYLGAKTGRDGVGGATMASAEFDESIEEKRPTVQ VGDPFTEKCLLEACLELMQTGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLDKVPVREERMTAYEMMLSESQERMLMV LRPEKEEEAKAIFVKWGLDFAIVGKTTDDLRFRILHQGEEVANLPIKELGDEAPEYDRPWTPAKVPSPLATNDIPQADVA DTLLQLVGSANNSSRRWVYEQYDTLIQGNSLQLPGGDAGVVRVEGHEAKALAFSSDVTPRYVEADPFEGGKQAVAECWRN LTATGALPLAATDNLNFGNPERPEIMSQLVHAIKGIGEACQALDFPIVSGNVSLYNETNGQAILPTPTIGGVGLVRDWSK MARIRFAVADETILLAGAPKSWGTHIGQSVYMRDIHGRTDGPAPHVDLAHERKVGDFVRGLIGDGLVTAVHDCSSGGLAL AVAEMAMASGIGATIAAPAEHDAIPVFYGEDQGRYVVTVANGAVETVAARAKAAGVALPVIGRTGGDAVKLGDARPVSVN ALRSAHEAWFPNYMGGDLAPDN
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family [H]
Homologues:
Organism=Homo sapiens, GI31657129, Length=702, Percent_Identity=24.2165242165242, Blast_Score=93, Evalue=9e-19, Organism=Escherichia coli, GI48994899, Length=768, Percent_Identity=24.8697916666667, Blast_Score=129, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6321498, Length=731, Percent_Identity=22.7086183310534, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24582111, Length=749, Percent_Identity=24.2990654205607, Blast_Score=104, Evalue=3e-22, Organism=Drosophila melanogaster, GI24582109, Length=749, Percent_Identity=24.2990654205607, Blast_Score=104, Evalue=3e-22, Organism=Drosophila melanogaster, GI17137292, Length=749, Percent_Identity=24.2990654205607, Blast_Score=104, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 79085; Mature: 78954
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISNTRPITPDLIASHGLKPDEYERILNLIGREPTFTELGIFSAMWNEHCSYKSSKKWL CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH RTLPTKGPRVIQGPGENAGVVDIDDGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDVF HHCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH TMGARPIAAMNALRFGSPDHPKTRHLVSGVVAGVGGYGNSFGVPTVGGEVEFDARYNGNI HHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEECCCE LVNAFAAGLAKTDAIFYSKAEGVGLPVVYLGAKTGRDGVGGATMASAEFDESIEEKRPTV EEEEHHHHHHHHCEEEEECCCCCCCCEEEEECCCCCCCCCCCEEECHHHHHHHHHCCCEE QVGDPFTEKCLLEACLELMQTGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLDKVPVR EECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHEECCCCCCCEEEEECCCCCCH EERMTAYEMMLSESQERMLMVLRPEKEEEAKAIFVKWGLDFAIVGKTTDDLRFRILHQGE HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCEEEEECCCC EVANLPIKELGDEAPEYDRPWTPAKVPSPLATNDIPQADVADTLLQLVGSANNSSRRWVY HHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEH EQYDTLIQGNSLQLPGGDAGVVRVEGHEAKALAFSSDVTPRYVEADPFEGGKQAVAECWR HHHHHHCCCCEEECCCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHH NLTATGALPLAATDNLNFGNPERPEIMSQLVHAIKGIGEACQALDFPIVSGNVSLYNETN CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEECCC GQAILPTPTIGGVGLVRDWSKMARIRFAVADETILLAGAPKSWGTHIGQSVYMRDIHGRT CCEEECCCCCCCCHHHHHHHHHHHEEEEEECCEEEEEECCCHHHHHHCCHHEEEECCCCC DGPAPHVDLAHERKVGDFVRGLIGDGLVTAVHDCSSGGLALAVAEMAMASGIGATIAAPA CCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHCCCCCHHHHHHHHHHHCCCCCEEECCC EHDAIPVFYGEDQGRYVVTVANGAVETVAARAKAAGVALPVIGRTGGDAVKLGDARPVSV CCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHCCEEEEEEECCCCCEEEECCCCCCCH NALRSAHEAWFPNYMGGDLAPDN HHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TISNTRPITPDLIASHGLKPDEYERILNLIGREPTFTELGIFSAMWNEHCSYKSSKKWL CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH RTLPTKGPRVIQGPGENAGVVDIDDGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDVF HHCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH TMGARPIAAMNALRFGSPDHPKTRHLVSGVVAGVGGYGNSFGVPTVGGEVEFDARYNGNI HHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEECCCE LVNAFAAGLAKTDAIFYSKAEGVGLPVVYLGAKTGRDGVGGATMASAEFDESIEEKRPTV EEEEHHHHHHHHCEEEEECCCCCCCCEEEEECCCCCCCCCCCEEECHHHHHHHHHCCCEE QVGDPFTEKCLLEACLELMQTGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLDKVPVR EECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHEECCCCCCCEEEEECCCCCCH EERMTAYEMMLSESQERMLMVLRPEKEEEAKAIFVKWGLDFAIVGKTTDDLRFRILHQGE HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCEEEEECCCC EVANLPIKELGDEAPEYDRPWTPAKVPSPLATNDIPQADVADTLLQLVGSANNSSRRWVY HHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEH EQYDTLIQGNSLQLPGGDAGVVRVEGHEAKALAFSSDVTPRYVEADPFEGGKQAVAECWR HHHHHHCCCCEEECCCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHH NLTATGALPLAATDNLNFGNPERPEIMSQLVHAIKGIGEACQALDFPIVSGNVSLYNETN CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEECCC GQAILPTPTIGGVGLVRDWSKMARIRFAVADETILLAGAPKSWGTHIGQSVYMRDIHGRT CCEEECCCCCCCCHHHHHHHHHHHEEEEEECCEEEEEECCCHHHHHHCCHHEEEECCCCC DGPAPHVDLAHERKVGDFVRGLIGDGLVTAVHDCSSGGLALAVAEMAMASGIGATIAAPA CCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHCCCCCHHHHHHHHHHHCCCCCEEECCC EHDAIPVFYGEDQGRYVVTVANGAVETVAARAKAAGVALPVIGRTGGDAVKLGDARPVSV CCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHCCEEEEEEECCCCCEEEECCCCCCCH NALRSAHEAWFPNYMGGDLAPDN HHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA