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The map label for this gene is cbbE [H]

Identifier: 150396702

GI number: 150396702

Start: 1575045

End: 1575725

Strand: Direct

Name: cbbE [H]

Synonym: Smed_1489

Alternate gene names: 150396702

Gene position: 1575045-1575725 (Clockwise)

Preceding gene: 150396701

Following gene: 150396703

Centisome position: 41.65

GC content: 60.94

Gene sequence:

>681_bases
ATGATGACCCACCCCATTCGCATTGCCCCGTCCATCCTGGCGGCCGACTTCTCCAAGCTCGGCCAGGAGGTTCGCGACGT
CACCCAAGCGGGCGCCGACTGGATTCATCTCGATGTCATGGACGGGCATTTCGTGCCTAACATCACGTTCGGACCCGATG
TCATCAAGTCGCTGCGCCCGCACACCCAGGCGACCTTCGACTGCCACCTGATGATCGCGCCGGCCGACCCCTTTCTCGAG
GCATTTGCGAAGGCCGGTTGCGATATCATTACCGTTCATGCCGAAGCAGGTCCGCATTTGCACCGTTCGCTGCAGACGGT
GAGGTCCCTCGGAAAAAAGGCCGGCGTCTCGCTTAATCCGGCGACGCCGGAGGACGCTCTCGAATACGTGCTTGACACTG
TCGACCTCGTTCTGGTCATGACGGTGAATCCGGGATTTGGTGGGCAAAAATTTGTCGACGCGACCGAGGAGAAGATCCGC
CGGATAAAGGCAATGATCGGTAGCCGTCCGATCGAAATCGAGGTGGATGGCGGTATAGCGCCTGAAACGGCAGCAGTCGC
GGCCAAAGCGGGTGCCAACGTACTGGTCGCGGGCTCAGCCATCTTCAAGGGCGGCTCCGTCGAATCCTATCGCGGCGCCA
TCGAAACGCTACGCGCACGGGCGGAAAAGGCGCGCGGATGA

Upstream 100 bases:

>100_bases
GCCGATTCAAACAACATGCCGCGGATCAAATACAGCACAGATTTTCGCGTGTCTGACGGATGCGCGGCGCTGTACGGCGC
GGGAAAGAGCCGGAGCCCTG

Downstream 100 bases:

>100_bases
AATTTTGCCCGACAACCGCAAGCATGATTGCCGCCGCAAGCGCGATGGCGGCCGCGCTGACCGCATCGGGTGCCGCGGCC
GGCGATTATGCCGCCTTTCA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MMTHPIRIAPSILAADFSKLGQEVRDVTQAGADWIHLDVMDGHFVPNITFGPDVIKSLRPHTQATFDCHLMIAPADPFLE
AFAKAGCDIITVHAEAGPHLHRSLQTVRSLGKKAGVSLNPATPEDALEYVLDTVDLVLVMTVNPGFGGQKFVDATEEKIR
RIKAMIGSRPIEIEVDGGIAPETAAVAAKAGANVLVAGSAIFKGGSVESYRGAIETLRARAEKARG

Sequences:

>Translated_226_residues
MMTHPIRIAPSILAADFSKLGQEVRDVTQAGADWIHLDVMDGHFVPNITFGPDVIKSLRPHTQATFDCHLMIAPADPFLE
AFAKAGCDIITVHAEAGPHLHRSLQTVRSLGKKAGVSLNPATPEDALEYVLDTVDLVLVMTVNPGFGGQKFVDATEEKIR
RIKAMIGSRPIEIEVDGGIAPETAAVAAKAGANVLVAGSAIFKGGSVESYRGAIETLRARAEKARG
>Mature_226_residues
MMTHPIRIAPSILAADFSKLGQEVRDVTQAGADWIHLDVMDGHFVPNITFGPDVIKSLRPHTQATFDCHLMIAPADPFLE
AFAKAGCDIITVHAEAGPHLHRSLQTVRSLGKKAGVSLNPATPEDALEYVLDTVDLVLVMTVNPGFGGQKFVDATEEKIR
RIKAMIGSRPIEIEVDGGIAPETAAVAAKAGANVLVAGSAIFKGGSVESYRGAIETLRARAEKARG

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=225, Percent_Identity=40.4444444444444, Blast_Score=167, Evalue=9e-42,
Organism=Homo sapiens, GI219879828, Length=225, Percent_Identity=38.2222222222222, Blast_Score=152, Evalue=2e-37,
Organism=Homo sapiens, GI24307923, Length=174, Percent_Identity=32.183908045977, Blast_Score=91, Evalue=8e-19,
Organism=Escherichia coli, GI1789788, Length=219, Percent_Identity=47.0319634703196, Blast_Score=199, Evalue=9e-53,
Organism=Escherichia coli, GI1790523, Length=198, Percent_Identity=34.8484848484849, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1790754, Length=210, Percent_Identity=31.9047619047619, Blast_Score=101, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17552948, Length=220, Percent_Identity=41.8181818181818, Blast_Score=167, Evalue=5e-42,
Organism=Saccharomyces cerevisiae, GI6322341, Length=214, Percent_Identity=44.8598130841121, Blast_Score=175, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24586301, Length=213, Percent_Identity=41.7840375586854, Blast_Score=159, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24027; Mature: 24027

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTHPIRIAPSILAADFSKLGQEVRDVTQAGADWIHLDVMDGHFVPNITFGPDVIKSLRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHCCC
HTQATFDCHLMIAPADPFLEAFAKAGCDIITVHAEAGPHLHRSLQTVRSLGKKAGVSLNP
CCCCEEEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
ATPEDALEYVLDTVDLVLVMTVNPGFGGQKFVDATEEKIRRIKAMIGSRPIEIEVDGGIA
CCHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
PETAAVAAKAGANVLVAGSAIFKGGSVESYRGAIETLRARAEKARG
CHHHHHHHHCCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMTHPIRIAPSILAADFSKLGQEVRDVTQAGADWIHLDVMDGHFVPNITFGPDVIKSLRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHCCC
HTQATFDCHLMIAPADPFLEAFAKAGCDIITVHAEAGPHLHRSLQTVRSLGKKAGVSLNP
CCCCEEEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
ATPEDALEYVLDTVDLVLVMTVNPGFGGQKFVDATEEKIRRIKAMIGSRPIEIEVDGGIA
CCHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
PETAAVAAKAGANVLVAGSAIFKGGSVESYRGAIETLRARAEKARG
CHHHHHHHHCCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA