| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is gpt [H]
Identifier: 150396600
GI number: 150396600
Start: 1461420
End: 1461917
Strand: Direct
Name: gpt [H]
Synonym: Smed_1386
Alternate gene names: 150396600
Gene position: 1461420-1461917 (Clockwise)
Preceding gene: 150396599
Following gene: 150396602
Centisome position: 38.64
GC content: 59.44
Gene sequence:
>498_bases ATGTCTCTTCCCGAGAAAGCCTTTCCCGTATCCTGGGATCAATTCCATCGCGACGCCCGCGCTCTGGCCTGGCGGCTAGC GGATAACGGACAGGAATGGCGCGCGATGGTTTGCATCACGCGCGGCGGCCTTGTTCCGGCCGCGATCGTAAGCCGGGAAC TTAACATCCGGATGATCGAAACGGTCTGCATCGCCTCCTATCACGACTACGATACGCAAGGTCAGATGAAGGTGCTGAAG AGCATCTCACCGGAGATCGCCAAGAGCGGCGGCGAAGGCGTTCTCATCGTCGACGATTTGACAGACACCGGCAAAACCGC CGCCGAGGTTCGCGCGATGCTGCCAAAGGCGCATTTCGCCGCCGTCTACGCAAAGCCGAAAGGGCGTCCGCTGGTCGATA CTTTCGTTACCGAGGTCAGCCAGGATACTTGGATCTACTTCCCTTGGGATCTGGGCTTCACCTACCAGGAGCCTATCGCC AAGGGCACACGCGGTTAG
Upstream 100 bases:
>100_bases TTCATTGCCGTTATTGCATCAGACACGAAAGCGTCGGCCGTGTGGCCGCCGACCTGCAGCAACGCTTGCCACGGACAGTG GAAAGAAGCCGGAGCCCGCC
Downstream 100 bases:
>100_bases AACACGTTCGGGGAAAGATCGGAGCATTTTCTCAAAGCGGCGGCATGCTTTCGATGAGCATTTCGGCCGTCGCCGTACGG CCAGCTGCGACACCTGCTTC
Product: xanthine-guanine phosphoribosyltransferase
Products: NA
Alternate protein names: Xanthine-guanine phosphoribosyltransferase; XGPRT [H]
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSLPEKAFPVSWDQFHRDARALAWRLADNGQEWRAMVCITRGGLVPAAIVSRELNIRMIETVCIASYHDYDTQGQMKVLK SISPEIAKSGGEGVLIVDDLTDTGKTAAEVRAMLPKAHFAAVYAKPKGRPLVDTFVTEVSQDTWIYFPWDLGFTYQEPIA KGTRG
Sequences:
>Translated_165_residues MSLPEKAFPVSWDQFHRDARALAWRLADNGQEWRAMVCITRGGLVPAAIVSRELNIRMIETVCIASYHDYDTQGQMKVLK SISPEIAKSGGEGVLIVDDLTDTGKTAAEVRAMLPKAHFAAVYAKPKGRPLVDTFVTEVSQDTWIYFPWDLGFTYQEPIA KGTRG >Mature_164_residues SLPEKAFPVSWDQFHRDARALAWRLADNGQEWRAMVCITRGGLVPAAIVSRELNIRMIETVCIASYHDYDTQGQMKVLKS ISPEIAKSGGEGVLIVDDLTDTGKTAAEVRAMLPKAHFAAVYAKPKGRPLVDTFVTEVSQDTWIYFPWDLGFTYQEPIAK GTRG
Specific function: Acts on guanine, xanthine and to a lesser extent hypoxanthine [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786433, Length=155, Percent_Identity=48.3870967741936, Blast_Score=160, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.22 [H]
Molecular weight: Translated: 18374; Mature: 18243
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPEKAFPVSWDQFHRDARALAWRLADNGQEWRAMVCITRGGLVPAAIVSRELNIRMIE CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHCCCCEEEEH TVCIASYHDYDTQGQMKVLKSISPEIAKSGGEGVLIVDDLTDTGKTAAEVRAMLPKAHFA HEEHHHCCCCCCCHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEE AVYAKPKGRPLVDTFVTEVSQDTWIYFPWDLGFTYQEPIAKGTRG EEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SLPEKAFPVSWDQFHRDARALAWRLADNGQEWRAMVCITRGGLVPAAIVSRELNIRMIE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHCCCCEEEEH TVCIASYHDYDTQGQMKVLKSISPEIAKSGGEGVLIVDDLTDTGKTAAEVRAMLPKAHFA HEEHHHCCCCCCCHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEE AVYAKPKGRPLVDTFVTEVSQDTWIYFPWDLGFTYQEPIAKGTRG EEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]