| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396519
Identifier: 150396519
GI number: 150396519
Start: 1396280
End: 1396540
Strand: Direct
Name: 150396519
Synonym: Smed_1301
Alternate gene names: NA
Gene position: 1396280-1396540 (Clockwise)
Preceding gene: 150396518
Following gene: 150396520
Centisome position: 36.92
GC content: 62.07
Gene sequence:
>261_bases ATGACTACGTCCCCTCGCCTCATCGGCCGGAAGGAAGCGGCAGAATACTGCGGCATCTCTCCAACCTGCTTTTCGATGTG GGTCGCCAGCCACAAGATGCCCCCGGCAATACCCGGCACGCGCAAGTGGGACAAGCGAGCGATCGACGCGAAGCTCGACG AGATTAGTGGACTCGATGTTCGCGAGAAGCAGGCGGAAACCGGCTTGCAGAGATGGAGGCGTGAGCGCGACATGCGGCGA GCAGCACGAGAGGCGCGTTGA
Upstream 100 bases:
>100_bases CCGGTTTTGCAGCGGCCGCTCCAGACGGCGAGGAGAGGTTGGGCTTGTGGAAGAGGGAGCGCAACAGGAAGCCCAAAAGC AAATGGGGAGATCCTGCGCC
Downstream 100 bases:
>100_bases CCGCAACCATCTGTGGAGTTCCGCACCCCCGCCCTTCCCTGCCGCCGCTGGCCATGCTTAGTTGTGGTTGGGCTAAATTT CTTCTTTGAGGGGCATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MTTSPRLIGRKEAAEYCGISPTCFSMWVASHKMPPAIPGTRKWDKRAIDAKLDEISGLDVREKQAETGLQRWRRERDMRR AAREAR
Sequences:
>Translated_86_residues MTTSPRLIGRKEAAEYCGISPTCFSMWVASHKMPPAIPGTRKWDKRAIDAKLDEISGLDVREKQAETGLQRWRRERDMRR AAREAR >Mature_85_residues TTSPRLIGRKEAAEYCGISPTCFSMWVASHKMPPAIPGTRKWDKRAIDAKLDEISGLDVREKQAETGLQRWRRERDMRRA AREAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9930; Mature: 9798
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPRLIGRKEAAEYCGISPTCFSMWVASHKMPPAIPGTRKWDKRAIDAKLDEISGLDV CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC REKQAETGLQRWRRERDMRRAAREAR HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTSPRLIGRKEAAEYCGISPTCFSMWVASHKMPPAIPGTRKWDKRAIDAKLDEISGLDV CCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC REKQAETGLQRWRRERDMRRAAREAR HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA