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The map label for this gene is exoR [H]

Identifier: 150396372

GI number: 150396372

Start: 1227758

End: 1228561

Strand: Direct

Name: exoR [H]

Synonym: Smed_1153

Alternate gene names: 150396372

Gene position: 1227758-1228561 (Clockwise)

Preceding gene: 150396371

Following gene: 150396374

Centisome position: 32.46

GC content: 60.7

Gene sequence:

>804_bases
ATGCGCGCGGGTGAAATGAAGTCGCTGAGAGTTGCGGTGCTGGGCCTGTCGATGGCGGTTGGTGCCACGGCCGGCCCTGC
ACGAGCTTTCGACCCCGGAGCCGGGGTAACGAAGGAGTCTGGTCCCTTCGCGCTCTTCAAGTTCGGTTTTTCGGCCTATA
AGGACGGCAGGAAGGACGAAGCAGTCGAGGCCTATCGATATGCTGCCGAGAAGGGTCATACGGGTTCCCGTTGGGCTCTC
GCCAATATGTATGCCTATGGCGATGGTGTCGCGGAGAATGACCTCGAGGCATTCAAGATCTACAGCGAAATCGCGCAACA
GGGTGTCGAGCCCGGATCGGAAGACACGGGCTATTTCGTCAACGCTCTAATCTCGCTTGCCGGCTATTACCGGCGCGGCA
TTCCCGATACCCCCGTCGGATCCGACCTGTCGCAGGCCAGGCAGCTGTATTTCCAGGCGGCCTCCACCTTCGGCGTGGCG
GAAGCGCAGTTCCAACTGGCGCGCATGCTGCTTTCGGGCGAGGGCGGCAGCGTCAATGTCCAGCAGGCCAAGAAATGGCT
GAACCGGGCGCGCAAGAATGGACATGCCGGTGCCATGGGCGTTTTCGGCAACGTCATTTTCCAGGAAGGCCAGACCGCAC
GCGGTCTCGCTTATATGACCGCCGCGCTCGATCAATGTTCGCCCAAGGACAGGCCCTGGCTTCAGGCGATGCAGGAACAG
GCATTCTCGCTCGCAACCGAAGACGACCGCCGCGTCGCGATAACGATGTCCCAGAATATGCATCTGCAGAGCGACGACGA
TTGA

Upstream 100 bases:

>100_bases
ACTCGATCAGTTCGCTGGTGACGAGCGGTTGTGCATGGATCGATCTTTGCGACGGTGATGGGGTCGGCTTGGCCGGCTCG
AACGAAAGAAACTGATTGTT

Downstream 100 bases:

>100_bases
GTCGTTTCGGGTTTCGGGTATTCCCGATACCCCCCTAAGCGATCTCGAATGCGAATTCAGCCGTCACAGGTACGTGGTCG
GACGGCTTTTCCCAGGATCG

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRAGEMKSLRVAVLGLSMAVGATAGPARAFDPGAGVTKESGPFALFKFGFSAYKDGRKDEAVEAYRYAAEKGHTGSRWAL
ANMYAYGDGVAENDLEAFKIYSEIAQQGVEPGSEDTGYFVNALISLAGYYRRGIPDTPVGSDLSQARQLYFQAASTFGVA
EAQFQLARMLLSGEGGSVNVQQAKKWLNRARKNGHAGAMGVFGNVIFQEGQTARGLAYMTAALDQCSPKDRPWLQAMQEQ
AFSLATEDDRRVAITMSQNMHLQSDDD

Sequences:

>Translated_267_residues
MRAGEMKSLRVAVLGLSMAVGATAGPARAFDPGAGVTKESGPFALFKFGFSAYKDGRKDEAVEAYRYAAEKGHTGSRWAL
ANMYAYGDGVAENDLEAFKIYSEIAQQGVEPGSEDTGYFVNALISLAGYYRRGIPDTPVGSDLSQARQLYFQAASTFGVA
EAQFQLARMLLSGEGGSVNVQQAKKWLNRARKNGHAGAMGVFGNVIFQEGQTARGLAYMTAALDQCSPKDRPWLQAMQEQ
AFSLATEDDRRVAITMSQNMHLQSDDD
>Mature_267_residues
MRAGEMKSLRVAVLGLSMAVGATAGPARAFDPGAGVTKESGPFALFKFGFSAYKDGRKDEAVEAYRYAAEKGHTGSRWAL
ANMYAYGDGVAENDLEAFKIYSEIAQQGVEPGSEDTGYFVNALISLAGYYRRGIPDTPVGSDLSQARQLYFQAASTFGVA
EAQFQLARMLLSGEGGSVNVQQAKKWLNRARKNGHAGAMGVFGNVIFQEGQTARGLAYMTAALDQCSPKDRPWLQAMQEQ
AFSLATEDDRRVAITMSQNMHLQSDDD

Specific function: Negatively modulates exopolysaccharide (EPS) biosynthesis [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 28857; Mature: 28857

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGEMKSLRVAVLGLSMAVGATAGPARAFDPGAGVTKESGPFALFKFGFSAYKDGRKDE
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHEECCHHHHCCCCCHH
AVEAYRYAAEKGHTGSRWALANMYAYGDGVAENDLEAFKIYSEIAQQGVEPGSEDTGYFV
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH
NALISLAGYYRRGIPDTPVGSDLSQARQLYFQAASTFGVAEAQFQLARMLLSGEGGSVNV
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEH
QQAKKWLNRARKNGHAGAMGVFGNVIFQEGQTARGLAYMTAALDQCSPKDRPWLQAMQEQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
AFSLATEDDRRVAITMSQNMHLQSDDD
HHHHCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MRAGEMKSLRVAVLGLSMAVGATAGPARAFDPGAGVTKESGPFALFKFGFSAYKDGRKDE
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHEECCHHHHCCCCCHH
AVEAYRYAAEKGHTGSRWALANMYAYGDGVAENDLEAFKIYSEIAQQGVEPGSEDTGYFV
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH
NALISLAGYYRRGIPDTPVGSDLSQARQLYFQAASTFGVAEAQFQLARMLLSGEGGSVNV
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEH
QQAKKWLNRARKNGHAGAMGVFGNVIFQEGQTARGLAYMTAALDQCSPKDRPWLQAMQEQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
AFSLATEDDRRVAITMSQNMHLQSDDD
HHHHCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1711027; 11481430 [H]