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The map label for this gene is 150396271

Identifier: 150396271

GI number: 150396271

Start: 1119649

End: 1120095

Strand: Direct

Name: 150396271

Synonym: Smed_1050

Alternate gene names: NA

Gene position: 1119649-1120095 (Clockwise)

Preceding gene: 150396267

Following gene: 150396272

Centisome position: 29.61

GC content: 59.96

Gene sequence:

>447_bases
ATGATCGACGACATTTACAACAGCAGGATCCTCGAATTCGCAGGCAACGTCCCGCGCATCGGAATGTTGCCGGAGGCCGA
CGCCGAAGCAGCGGCGCACTCCAAGCTTTGCGGCTCTAAGGTGAGGATATGGCTGAAGATGGATGGCGACGTCGTCACCG
ATTTCGCCCATGACGTCAAGGCTTGCGCGCTCGGTCAAGCATCGTCTTCCATTATGGCCCGGCATGTCGTCGGCGCCCGT
GCGGACGAGATTCGCAAGGCCCGCGAGGACATGCTTGCCATGCTGAAGGCCGACGGGGAAGGTCCCTCAGGCCGTTTCGA
GGACATGCGTTTCTTGATGCCGGTCAAGGACTATAAGGCACGCCATGCCTCAACGATGCTGACTTTCGATGCCGTCGTCG
ATGCCATCTGCCAGATCGAGGCAAAGCGCCTCGCTAGCGCCGTCTGA

Upstream 100 bases:

>100_bases
TAAAAGAGCTCGAATGCGCCACGCCGTGCTTTTTTCCCGCCCCCTGGAGAAAATCATGCGCAGAATGGCCAAAACCACGA
AAAATCAACCGGATTCCTAA

Downstream 100 bases:

>100_bases
GCCATGTGTCCGCGATCCGATCATGCTGTGACCCGTCGCGAAATGCGCACCGCACAGAGCCGGAACTGGTCCGGACCGTT
CCGCAAGACGCCAGGGCGGC

Product: NifU domain-containing protein

Products: NA

Alternate protein names: NifU Domain-Containing Protein; NifU-Like Protein; Nitrogen Fixation Protein; NifU-Like Protein Involved In Fe-S Cluster Formation; NifU-Related Protein Involved In Fe-S Cluster Formation; Nitrogen-Fixing NifU-Like Protein; NIFU-Like Protein; NifU-Like N Terminal Domain; Nitrogen-Fixing NifU-Like; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Nifu Protein; NifU-Like Involved In Fe-S Cluster Formation; Nitrogen Fixation Protein NifU

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MIDDIYNSRILEFAGNVPRIGMLPEADAEAAAHSKLCGSKVRIWLKMDGDVVTDFAHDVKACALGQASSSIMARHVVGAR
ADEIRKAREDMLAMLKADGEGPSGRFEDMRFLMPVKDYKARHASTMLTFDAVVDAICQIEAKRLASAV

Sequences:

>Translated_148_residues
MIDDIYNSRILEFAGNVPRIGMLPEADAEAAAHSKLCGSKVRIWLKMDGDVVTDFAHDVKACALGQASSSIMARHVVGAR
ADEIRKAREDMLAMLKADGEGPSGRFEDMRFLMPVKDYKARHASTMLTFDAVVDAICQIEAKRLASAV
>Mature_148_residues
MIDDIYNSRILEFAGNVPRIGMLPEADAEAAAHSKLCGSKVRIWLKMDGDVVTDFAHDVKACALGQASSSIMARHVVGAR
ADEIRKAREDMLAMLKADGEGPSGRFEDMRFLMPVKDYKARHASTMLTFDAVVDAICQIEAKRLASAV

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16170; Mature: 16170

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDDIYNSRILEFAGNVPRIGMLPEADAEAAAHSKLCGSKVRIWLKMDGDVVTDFAHDVK
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHH
ACALGQASSSIMARHVVGARADEIRKAREDMLAMLKADGEGPSGRFEDMRFLMPVKDYKA
HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHH
RHASTMLTFDAVVDAICQIEAKRLASAV
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDDIYNSRILEFAGNVPRIGMLPEADAEAAAHSKLCGSKVRIWLKMDGDVVTDFAHDVK
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHH
ACALGQASSSIMARHVVGARADEIRKAREDMLAMLKADGEGPSGRFEDMRFLMPVKDYKA
HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHH
RHASTMLTFDAVVDAICQIEAKRLASAV
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA