| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cysQ [H]
Identifier: 150395647
GI number: 150395647
Start: 456479
End: 457297
Strand: Direct
Name: cysQ [H]
Synonym: Smed_0422
Alternate gene names: 150395647
Gene position: 456479-457297 (Clockwise)
Preceding gene: 150395646
Following gene: 150395648
Centisome position: 12.07
GC content: 64.22
Gene sequence:
>819_bases ATGTCAGAAACAGCCCATTCGATCGTGCCCGCCTGGGGCCAGGATCTCGAGCTCATTCTTGCGGCAGCAGTCGCGGCGGG TGACACGGCGCTCGGCTATTTTCGCAAGACGCTGGACGTTCGCTGGAAAAATGAAGGACGCTCTCCCGTCAGCGAGGCCG ACCTTGCCGCCAACGACATCCTCAAGAGTCGGCTGCTCTCTGCCCGGCCGGACTATGGCTGGCTTTCGGAGGAGACCGAC GACGATGAAAGCCGTCTCCTTCGCGAGACTGTCTTCGTTGTCGATCCGATCGACGGGACCCGGGCCTTCATCGCGGGGAA GGACCTCTGGTGCGTCAGCGTCGCCGTCGTTCATCGCGGACTTCCCGTGGCTGGCGTGCTCTATGCACCGTCCCTCGGCG AGATATTCCAGGCGACCCGCGACGGCGAAGTGCGGAAGAACGGCAAACCGATCGCGGTGCGGGAGACGGCCTCGGGCGCG GTGCTGAAGGTGGCAGCGGCCGAGGATATCATGGGCAAGCTGGCTCTGCCCTATCGCAAGACGATGATGCGCGTATCACA TGTACCGTCGCTCGCCTATCGGCTTGCGATGATCGCGGACGGCCGTATCGACGGAACGATCGTCAAGCGGAACTCGCATG ATTGGGATCTCGCGGCCGCCGACCTCATTCTTTCGCGCGCCGGCGGCGCGCTTTGCGGTCTCGACAACGAGCCCTTGTTC TACAATCGCCCGACCGTCACCCACGGCGTTCTTGCCGCGGCATCGGGGGCGGCGCTACCGGCCTTGCTGGCCGCTTCCAG GCCTCTTGAGCCCCATTGA
Upstream 100 bases:
>100_bases CGTGCCCCGCGTCTAAACTCTTTGGAATCGATCGCGCTCATTTTTTGGGTCGATCCGACCTAAACATCGTGATCTAAAGG CGCCGCTCGTAAGGAGTTGC
Downstream 100 bases:
>100_bases CCTTTAGGGGCGAATGCCGCAAACCACCCCCATACCAGTAAGAACACAGATGGAAATTCCATGGCTCACGACTCCGAGAA AAAACAACGGCTGCACCTCG
Product: inositol monophosphatase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSETAHSIVPAWGQDLELILAAAVAAGDTALGYFRKTLDVRWKNEGRSPVSEADLAANDILKSRLLSARPDYGWLSEETD DDESRLLRETVFVVDPIDGTRAFIAGKDLWCVSVAVVHRGLPVAGVLYAPSLGEIFQATRDGEVRKNGKPIAVRETASGA VLKVAAAEDIMGKLALPYRKTMMRVSHVPSLAYRLAMIADGRIDGTIVKRNSHDWDLAAADLILSRAGGALCGLDNEPLF YNRPTVTHGVLAAASGAALPALLAASRPLEPH
Sequences:
>Translated_272_residues MSETAHSIVPAWGQDLELILAAAVAAGDTALGYFRKTLDVRWKNEGRSPVSEADLAANDILKSRLLSARPDYGWLSEETD DDESRLLRETVFVVDPIDGTRAFIAGKDLWCVSVAVVHRGLPVAGVLYAPSLGEIFQATRDGEVRKNGKPIAVRETASGA VLKVAAAEDIMGKLALPYRKTMMRVSHVPSLAYRLAMIADGRIDGTIVKRNSHDWDLAAADLILSRAGGALCGLDNEPLF YNRPTVTHGVLAAASGAALPALLAASRPLEPH >Mature_271_residues SETAHSIVPAWGQDLELILAAAVAAGDTALGYFRKTLDVRWKNEGRSPVSEADLAANDILKSRLLSARPDYGWLSEETDD DESRLLRETVFVVDPIDGTRAFIAGKDLWCVSVAVVHRGLPVAGVLYAPSLGEIFQATRDGEVRKNGKPIAVRETASGAV LKVAAAEDIMGKLALPYRKTMMRVSHVPSLAYRLAMIADGRIDGTIVKRNSHDWDLAAADLILSRAGGALCGLDNEPLFY NRPTVTHGVLAAASGAALPALLAASRPLEPH
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788882, Length=202, Percent_Identity=28.2178217821782, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1790659, Length=126, Percent_Identity=34.1269841269841, Blast_Score=65, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6320493, Length=219, Percent_Identity=26.027397260274, Blast_Score=76, Evalue=5e-15, Organism=Drosophila melanogaster, GI21357957, Length=229, Percent_Identity=27.0742358078603, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24664922, Length=213, Percent_Identity=26.2910798122066, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 29131; Mature: 28999
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETAHSIVPAWGQDLELILAAAVAAGDTALGYFRKTLDVRWKNEGRSPVSEADLAANDI CCCCCCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHH LKSRLLSARPDYGWLSEETDDDESRLLRETVFVVDPIDGTRAFIAGKDLWCVSVAVVHRG HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHHCC LPVAGVLYAPSLGEIFQATRDGEVRKNGKPIAVRETASGAVLKVAAAEDIMGKLALPYRK CCEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHCCHHHH TMMRVSHVPSLAYRLAMIADGRIDGTIVKRNSHDWDLAAADLILSRAGGALCGLDNEPLF HHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEECCCCCCEE YNRPTVTHGVLAAASGAALPALLAASRPLEPH ECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure SETAHSIVPAWGQDLELILAAAVAAGDTALGYFRKTLDVRWKNEGRSPVSEADLAANDI CCCCCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHH LKSRLLSARPDYGWLSEETDDDESRLLRETVFVVDPIDGTRAFIAGKDLWCVSVAVVHRG HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHHCC LPVAGVLYAPSLGEIFQATRDGEVRKNGKPIAVRETASGAVLKVAAAEDIMGKLALPYRK CCEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHCCHHHH TMMRVSHVPSLAYRLAMIADGRIDGTIVKRNSHDWDLAAADLILSRAGGALCGLDNEPLF HHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEECCCCCCEE YNRPTVTHGVLAAASGAALPALLAASRPLEPH ECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]