| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is hisZ [H]
Identifier: 150395629
GI number: 150395629
Start: 434278
End: 435411
Strand: Direct
Name: hisZ [H]
Synonym: Smed_0404
Alternate gene names: 150395629
Gene position: 434278-435411 (Clockwise)
Preceding gene: 150395628
Following gene: 150395630
Centisome position: 11.48
GC content: 65.78
Gene sequence:
>1134_bases ATGCCTCTCATTGATCTTCCCGGTTTCGCCGGCGACCTCCTTGCGGATTTCGAACGCCGGAACACGCTGCGCGTCGACAC GCCGGTCATCCAGCCTGCCGAGCCTTTCCTCGACATGGCCGGGGAAGACCTGCGCCGGCGGATCTTCATGACCGAGAGCG AAACCGGCGAGAGCCTGTGCCTGCGGCCGGAGTTCACCATCCCCGTCTGCCTGCGACATATCGAGACCGCAACCGGAACG CCGCAACGCTACGCCTATCTGGGCGAGGTGTTCCGGCAGCGCCGCGACGGATCGAGCGAGTTCTACCAGGCGGGCATCGA AGATCTGGGCGATCCGGATACGGCCGCCGCTGATGCGCGGGTGGTCGGTGATGCCTTGTTCGTCCTTTCCAATCGACTGC CGGGCGAGCGGCTGAAGGTCACGCTTGGCGACCAGTCGGTCTTCGAAGCGGTGATTGCCGCCTGTGGCCTGCCCGGCGGT TGGCAGAAACGGCTCATTCATGCCTTCGGGGATCAGAAGCAGTTGGACAGGCTCTTGGCCGAGCTGGCCGACCCGAAATC GCCCGGCGTCTTCGGCCACGACGTCGAGCGCGTCGCAGCCTTGGGCATGCTCGACGACGAAGAGCGGCTCGTCGCTCATA TCGGCGAGACGATGGAGGCGACCGGTTATTCGACCAATGCCAGCCGCTCGCCCCGCGATATCGCCCGGCGCCTGAAGGAA AAGGTCGAACTTGCAGCCACCCGGCTGGACAAGGAAGCGCTTGCCGTCATGCGCGCGTTCCTCGCTCTTGATCTGCCGCT CGCCGACGCTCCGGCCGCGCTCCACAGCTTCGCCGGCAAGGCGCGTCTGAGGATCGACGACGCGCTGGAACTCTTCGATG CGCGCGTGGCTGCGCTCGCATTGGCGGGCGCCGATCCCGGCCCGATGCGTTACCGCGCCGCCTTCGGACGACCGCTCGAC TATTACACGGGCCTCGTCTTCGAAATCCACGTCGAAGGCACCCCCGCAGTGCTCGCCGGCGGCGGCCGGTTCGACCGCCT CCTCACCTTGCTCGGCGCTCGTGAGCATATTCCGGCCGTCGGCTTTTCTCTTTGGCTCGACCGGATAGAACAGGCTGCGG GGAGAGAGAAATGA
Upstream 100 bases:
>100_bases GTGCCGCTCAGATTTCCGTCCCGGAAGGCGAACTCGTCGTTAAGATTCGCGAAATTCTCGCGGACCAGGCCGAGGACCGG AAAAGGGCGGGTTGACCGCG
Downstream 100 bases:
>100_bases CCGTCACTATTGCGCTGCCCTCAAAGGGGCGGATGAAGGATGAGTCCTCGGCTATTTTCGAACGCGCCGGCATGAGGATC ACGGCGGTTGGCAACGACCG
Product: ATP phosphoribosyltransferase regulatory subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPLIDLPGFAGDLLADFERRNTLRVDTPVIQPAEPFLDMAGEDLRRRIFMTESETGESLCLRPEFTIPVCLRHIETATGT PQRYAYLGEVFRQRRDGSSEFYQAGIEDLGDPDTAAADARVVGDALFVLSNRLPGERLKVTLGDQSVFEAVIAACGLPGG WQKRLIHAFGDQKQLDRLLAELADPKSPGVFGHDVERVAALGMLDDEERLVAHIGETMEATGYSTNASRSPRDIARRLKE KVELAATRLDKEALAVMRAFLALDLPLADAPAALHSFAGKARLRIDDALELFDARVAALALAGADPGPMRYRAAFGRPLD YYTGLVFEIHVEGTPAVLAGGGRFDRLLTLLGAREHIPAVGFSLWLDRIEQAAGREK
Sequences:
>Translated_377_residues MPLIDLPGFAGDLLADFERRNTLRVDTPVIQPAEPFLDMAGEDLRRRIFMTESETGESLCLRPEFTIPVCLRHIETATGT PQRYAYLGEVFRQRRDGSSEFYQAGIEDLGDPDTAAADARVVGDALFVLSNRLPGERLKVTLGDQSVFEAVIAACGLPGG WQKRLIHAFGDQKQLDRLLAELADPKSPGVFGHDVERVAALGMLDDEERLVAHIGETMEATGYSTNASRSPRDIARRLKE KVELAATRLDKEALAVMRAFLALDLPLADAPAALHSFAGKARLRIDDALELFDARVAALALAGADPGPMRYRAAFGRPLD YYTGLVFEIHVEGTPAVLAGGGRFDRLLTLLGAREHIPAVGFSLWLDRIEQAAGREK >Mature_376_residues PLIDLPGFAGDLLADFERRNTLRVDTPVIQPAEPFLDMAGEDLRRRIFMTESETGESLCLRPEFTIPVCLRHIETATGTP QRYAYLGEVFRQRRDGSSEFYQAGIEDLGDPDTAAADARVVGDALFVLSNRLPGERLKVTLGDQSVFEAVIAACGLPGGW QKRLIHAFGDQKQLDRLLAELADPKSPGVFGHDVERVAALGMLDDEERLVAHIGETMEATGYSTNASRSPRDIARRLKEK VELAATRLDKEALAVMRAFLALDLPLADAPAALHSFAGKARLRIDDALELFDARVAALALAGADPGPMRYRAAFGRPLDY YTGLVFEIHVEGTPAVLAGGGRFDRLLTLLGAREHIPAVGFSLWLDRIEQAAGREK
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine [H]
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR004516 [H]
Pfam domain/function: PF00587 tRNA-synt_2b [H]
EC number: NA
Molecular weight: Translated: 41232; Mature: 41100
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIDLPGFAGDLLADFERRNTLRVDTPVIQPAEPFLDMAGEDLRRRIFMTESETGESLC CCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHCCHHHHHHEEECCCCCCCCEE LRPEFTIPVCLRHIETATGTPQRYAYLGEVFRQRRDGSSEFYQAGIEDLGDPDTAAADAR ECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH VVGDALFVLSNRLPGERLKVTLGDQSVFEAVIAACGLPGGWQKRLIHAFGDQKQLDRLLA HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHH ELADPKSPGVFGHDVERVAALGMLDDEERLVAHIGETMEATGYSTNASRSPRDIARRLKE HHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHH KVELAATRLDKEALAVMRAFLALDLPLADAPAALHSFAGKARLRIDDALELFDARVAALA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHH LAGADPGPMRYRAAFGRPLDYYTGLVFEIHVEGTPAVLAGGGRFDRLLTLLGAREHIPAV HCCCCCCCCHHHHHCCCCHHHHCCEEEEEEECCCCEEEECCCHHHHHHHHHCCHHCCCHH GFSLWLDRIEQAAGREK HHHHHHHHHHHHHCCCC >Mature Secondary Structure PLIDLPGFAGDLLADFERRNTLRVDTPVIQPAEPFLDMAGEDLRRRIFMTESETGESLC CCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHCCHHHHHHEEECCCCCCCCEE LRPEFTIPVCLRHIETATGTPQRYAYLGEVFRQRRDGSSEFYQAGIEDLGDPDTAAADAR ECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH VVGDALFVLSNRLPGERLKVTLGDQSVFEAVIAACGLPGGWQKRLIHAFGDQKQLDRLLA HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHH ELADPKSPGVFGHDVERVAALGMLDDEERLVAHIGETMEATGYSTNASRSPRDIARRLKE HHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHH KVELAATRLDKEALAVMRAFLALDLPLADAPAALHSFAGKARLRIDDALELFDARVAALA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHH LAGADPGPMRYRAAFGRPLDYYTGLVFEIHVEGTPAVLAGGGRFDRLLTLLGAREHIPAV HCCCCCCCCHHHHHCCCCHHHHCCEEEEEEECCCCEEEECCCHHHHHHHHHCCHHCCCHH GFSLWLDRIEQAAGREK HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]