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The map label for this gene is piv [H]

Identifier: 150395601

GI number: 150395601

Start: 402469

End: 403326

Strand: Direct

Name: piv [H]

Synonym: Smed_0376

Alternate gene names: 150395601

Gene position: 402469-403326 (Clockwise)

Preceding gene: 150395599

Following gene: 150395603

Centisome position: 10.64

GC content: 63.64

Gene sequence:

>858_bases
ATGCACTGCGCACAGCACTGCAACCGTACCAGGGGCACCGCCACGCTCGCGGTGTGCGAAGCGACCGGCGGCCATGAGGA
CACCCTGCTCGGCGCGCTGCTGGAACTGGCTATTCCCGCCCATCGCGCGGATCCCGCCAAGGTCAAGGCTTATATCGGAT
CCTTCGGCAAGCGCGCCAAGACCGATCCGATCGATGCCCGCTGGCTGTCCCATTATGGCCGAGACGGTGCCGCAGTCCTG
CCGCGCTGGCAGCCGGCCGATCCCTGCCAGCAGCAATTTGCGCTCTTCGTCGCCCGCCGTCTCGACCTCGTCGCCATGCG
AGTGCAGGAGAAAAACCGAATGAAAGCCCCGCGCAGCCGCCTGATCGCCGACAATATCTCGGCCCGTCTCGCCGAACCGG
ACCGCCCTATAGAAACTCTCAATGCACAGATCGGCACCCTGATCGCCGAAAGCCATAACCTGGCGCTGCGAGCCAAGGCG
TTGCGCTCGGTGCCCGGCATCGGACCGGTGCTGGTGTCGCTGCTCTTGGCCGTCATGCCCGAACTCGGCAGCCTCAACCG
CAGGCAGGCCGCAAGCCTTGCCGGCTGCGCCCCCCATCCCAAGGACAGCGGCAAGGCCAGTTGGCACCGCAGTACCACCG
GCGGACGCCGCCAGATCAGACCGGCACTCTTTATCGCCGCTCTCGCCGCCTGCCGTGGCGACAATCATCTCGCCATCGCC
TACAACGCACTGCTTAACACCGCAAAACCGAAACGCGTCGCGCTTACCGCCATCATGCGTAAGATCATCACCATCGCAAA
CGCCCGCATCAGGGACGCTTTAAATCAGCAAAACGAAACAACAGAAATTCACGCTTAA

Upstream 100 bases:

>100_bases
CAGAACACACCGAAATCCAGTTCGTCCTCGGCCTGGACGTTTCCTGCAACACCGTCACCCTGTATGACGACCTGCACCCT
GACCGTCGCCAACGACGCCG

Downstream 100 bases:

>100_bases
ACTGACTTGGTGAGGGGAGAGTAGAAGAACGCGGCGCCTCGTGAGCCCTCACTTGCCTGCTGCCCTCGTCTCCACTTCCC
GGATCGCCAGACGGTGGCCC

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: PIVML [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MHCAQHCNRTRGTATLAVCEATGGHEDTLLGALLELAIPAHRADPAKVKAYIGSFGKRAKTDPIDARWLSHYGRDGAAVL
PRWQPADPCQQQFALFVARRLDLVAMRVQEKNRMKAPRSRLIADNISARLAEPDRPIETLNAQIGTLIAESHNLALRAKA
LRSVPGIGPVLVSLLLAVMPELGSLNRRQAASLAGCAPHPKDSGKASWHRSTTGGRRQIRPALFIAALAACRGDNHLAIA
YNALLNTAKPKRVALTAIMRKIITIANARIRDALNQQNETTEIHA

Sequences:

>Translated_285_residues
MHCAQHCNRTRGTATLAVCEATGGHEDTLLGALLELAIPAHRADPAKVKAYIGSFGKRAKTDPIDARWLSHYGRDGAAVL
PRWQPADPCQQQFALFVARRLDLVAMRVQEKNRMKAPRSRLIADNISARLAEPDRPIETLNAQIGTLIAESHNLALRAKA
LRSVPGIGPVLVSLLLAVMPELGSLNRRQAASLAGCAPHPKDSGKASWHRSTTGGRRQIRPALFIAALAACRGDNHLAIA
YNALLNTAKPKRVALTAIMRKIITIANARIRDALNQQNETTEIHA
>Mature_285_residues
MHCAQHCNRTRGTATLAVCEATGGHEDTLLGALLELAIPAHRADPAKVKAYIGSFGKRAKTDPIDARWLSHYGRDGAAVL
PRWQPADPCQQQFALFVARRLDLVAMRVQEKNRMKAPRSRLIADNISARLAEPDRPIETLNAQIGTLIAESHNLALRAKA
LRSVPGIGPVLVSLLLAVMPELGSLNRRQAASLAGCAPHPKDSGKASWHRSTTGGRRQIRPALFIAALAACRGDNHLAIA
YNALLNTAKPKRVALTAIMRKIITIANARIRDALNQQNETTEIHA

Specific function: May be the site-specific invertase required for pilin gene inversion. Moraxella can express either a Q or I pilin; the inversion of 2 kb of DNA determines which pilin is expressed [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 30909; Mature: 30909

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCAQHCNRTRGTATLAVCEATGGHEDTLLGALLELAIPAHRADPAKVKAYIGSFGKRAK
CCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
TDPIDARWLSHYGRDGAAVLPRWQPADPCQQQFALFVARRLDLVAMRVQEKNRMKAPRSR
CCCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LIADNISARLAEPDRPIETLNAQIGTLIAESHNLALRAKALRSVPGIGPVLVSLLLAVMP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
ELGSLNRRQAASLAGCAPHPKDSGKASWHRSTTGGRRQIRPALFIAALAACRGDNHLAIA
HHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
YNALLNTAKPKRVALTAIMRKIITIANARIRDALNQQNETTEIHA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHCAQHCNRTRGTATLAVCEATGGHEDTLLGALLELAIPAHRADPAKVKAYIGSFGKRAK
CCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
TDPIDARWLSHYGRDGAAVLPRWQPADPCQQQFALFVARRLDLVAMRVQEKNRMKAPRSR
CCCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LIADNISARLAEPDRPIETLNAQIGTLIAESHNLALRAKALRSVPGIGPVLVSLLLAVMP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
ELGSLNRRQAASLAGCAPHPKDSGKASWHRSTTGGRRQIRPALFIAALAACRGDNHLAIA
HHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
YNALLNTAKPKRVALTAIMRKIITIANARIRDALNQQNETTEIHA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2403542 [H]