Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150395581

Identifier: 150395581

GI number: 150395581

Start: 380277

End: 380921

Strand: Direct

Name: 150395581

Synonym: Smed_0355

Alternate gene names: NA

Gene position: 380277-380921 (Clockwise)

Preceding gene: 150395580

Following gene: 150395582

Centisome position: 10.06

GC content: 62.64

Gene sequence:

>645_bases
ATGAAACGATCGAAAGCCGAAATTGTCAGGGAATATGGACCTTTTCCCGGTACTGAACAGGTGCATGGCGTCACCTTCGA
CGGCAGGCACGTCTGGTTCGCCTCGGGCGACCGGCTGAACGCACTCGACCCCGGAAGTGGACAGACGGTGCGCTCCATCG
ATGTTGCCGCCCATGCGGGAACCGCCTTCGACGGTCAGCACCTGTTCCAGATCGCGGAGGATCGCATCCAGAAGATCGAT
CCTGAGACCGGTCGCGTGCTTGCAACGATTCCGGCGCCTGCCGGGGGCGGTGATTCCGGCCTTGCCTGGGCCGAAGGAAC
GCTCTGGGTCGGCTGTTACCAGGGGCGCAAGATCCATCAGGTCGATCCCGAAACCGGGCGGGTCCTTCGCACCATCGAGT
CCAACCGGGTCGTGACCGGTGTCACCTGGGTTGACGGTGAGCTTTGGCACGGCACCTGGGAAGGCGACGAGAGCGATGTG
CGGCGTCTGGATCCGGATACAGGAGAGGTGTTGGAGATGATAGAAATGCCGTCGGGCACCGGCGTTTCCGGTCTTGAATC
CGACGGCGGCGACCGTTTCTTCTGTGGAGGAGGAAACAGCGGAAAGGTCCGCGCGATCCGCAAGCCCGGCCGGATCTCCG
CATAG

Upstream 100 bases:

>100_bases
TGACCCCGTCCATACCGGGCTTCCCGACAGTCTTGTTACTCCCGGGGCCGTTGCCGAGCGACTAGAATGCGAGATGCAAC
AGGCGACGAGGATTTGAAAT

Downstream 100 bases:

>100_bases
GCGATCCATGGCCCGTATGGAAGGAAGGTCCCGGAGCGTTTAGAAGGGACAATCGCGTTGGCTCCGGGACCTTCAGGCGC
CGCAGCGGCTGACGAGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKRSKAEIVREYGPFPGTEQVHGVTFDGRHVWFASGDRLNALDPGSGQTVRSIDVAAHAGTAFDGQHLFQIAEDRIQKID
PETGRVLATIPAPAGGGDSGLAWAEGTLWVGCYQGRKIHQVDPETGRVLRTIESNRVVTGVTWVDGELWHGTWEGDESDV
RRLDPDTGEVLEMIEMPSGTGVSGLESDGGDRFFCGGGNSGKVRAIRKPGRISA

Sequences:

>Translated_214_residues
MKRSKAEIVREYGPFPGTEQVHGVTFDGRHVWFASGDRLNALDPGSGQTVRSIDVAAHAGTAFDGQHLFQIAEDRIQKID
PETGRVLATIPAPAGGGDSGLAWAEGTLWVGCYQGRKIHQVDPETGRVLRTIESNRVVTGVTWVDGELWHGTWEGDESDV
RRLDPDTGEVLEMIEMPSGTGVSGLESDGGDRFFCGGGNSGKVRAIRKPGRISA
>Mature_214_residues
MKRSKAEIVREYGPFPGTEQVHGVTFDGRHVWFASGDRLNALDPGSGQTVRSIDVAAHAGTAFDGQHLFQIAEDRIQKID
PETGRVLATIPAPAGGGDSGLAWAEGTLWVGCYQGRKIHQVDPETGRVLRTIESNRVVTGVTWVDGELWHGTWEGDESDV
RRLDPDTGEVLEMIEMPSGTGVSGLESDGGDRFFCGGGNSGKVRAIRKPGRISA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23011; Mature: 23011

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSKAEIVREYGPFPGTEQVHGVTFDGRHVWFASGDRLNALDPGSGQTVRSIDVAAHAG
CCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCC
TAFDGQHLFQIAEDRIQKIDPETGRVLATIPAPAGGGDSGLAWAEGTLWVGCYQGRKIHQ
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCEEEEEEECCCEEEE
VDPETGRVLRTIESNRVVTGVTWVDGELWHGTWEGDESDVRRLDPDTGEVLEMIEMPSGT
CCCCCCCEEEEECCCEEEEEEEEECCEEEECCCCCCHHHHHHCCCCHHHHHHHHHCCCCC
GVSGLESDGGDRFFCGGGNSGKVRAIRKPGRISA
CCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MKRSKAEIVREYGPFPGTEQVHGVTFDGRHVWFASGDRLNALDPGSGQTVRSIDVAAHAG
CCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCC
TAFDGQHLFQIAEDRIQKIDPETGRVLATIPAPAGGGDSGLAWAEGTLWVGCYQGRKIHQ
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCEEEEEEECCCEEEE
VDPETGRVLRTIESNRVVTGVTWVDGELWHGTWEGDESDVRRLDPDTGEVLEMIEMPSGT
CCCCCCCEEEEECCCEEEEEEEEECCEEEECCCCCCHHHHHHCCCCHHHHHHHHHCCCCC
GVSGLESDGGDRFFCGGGNSGKVRAIRKPGRISA
CCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA