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The map label for this gene is ydgG [C]

Identifier: 150395562

GI number: 150395562

Start: 365106

End: 366236

Strand: Direct

Name: ydgG [C]

Synonym: Smed_0336

Alternate gene names: 150395562

Gene position: 365106-366236 (Clockwise)

Preceding gene: 150395561

Following gene: 150395564

Centisome position: 9.65

GC content: 61.98

Gene sequence:

>1131_bases
ATGGATATAGCCGAACGGACAACGGCCAAGCGTCGGCGAAAGCGGGAAGCGGCGAAAGAAATCGCTCTGGCCGAGGCATC
GGCGATCGTTGCCCGGAAACGCGACAGCATAGAGCTTGCCGGCAGCTGGAGCGTGATCGGTCTGTTCGTGATCGCCTGCG
CAGCGGTGGTTTATGCGATGGAACCGATCCTCCTGCCGATAACGCTTGCGGTCGTTGTCGGTATCGTCCTCGGCCGGGCT
GCCGATGAGCTTGCCCGGTTCGGTCTTCCGCCTATCTTCGGCGGGCTGTTGCTGGCGCTTTTCTTCCTGCTGGGCCTGTC
ATATCTGGTCAATGCCATTCTCTGGCCGATTACCGAGGTCGCGCGCGAAGCGCCGCGGCTGGTCGAAGGCGTGATCGAGC
GGATACTGCCCTATCTGCAGCGCTTCGAATGGCTGAACCTGGTGCTTGCCCGCGGGACGGAAGAGGAGGCCTTTGCCGAC
GTCATCGTCAAGAATGCGGGGCCGCTGATCGGTGGCGCGGCGGCCAGCCTCACCCCGGCTCTCGTGCAGACCCTGATCTT
TTTGGCGGCGCTCGTTCTATTTCTGCTCGGGCGCGTTCAACTGCGCAGCACGATCATTCTTGCCTTCCCCAGCCGCGAAG
GGCGTTTGACGGCAATCCGGGTCATGAACGCCCTCGAGGATGCGCTTGGGCATTATTTCTCGACCGCAAGCCTGATCTAC
CTGGCGCTTGGCGCAGTTACCATGGTGGTCGCGCTCGTCGGCGGATTGGCGATGCCGCCGCTTTGGGGCCTTTTCGCCTT
CGTCTCGAGTTTCATTCCCTATCTCGGTGTCACGTTCATGACCCTGGCTTTGCTCGTTGGCGGGCTGATGACCCATGATG
CGCTCATCGTTGCGCTCGCCCCGGCCACCGCCTTCTTCTTCGTTCACCTCGCCATGGAGAACCTGCTGGTGCCCGCCATC
CTCGGCCAGCGCTTCGATATCAATCCATTCCTGATCTTCGTAGCGATCATCTTCTGGACGTGGATGTGGGGCGCCGTCGG
CGCGATCCTCGCCTTTCCGCTATCGCTGATCGCGATGATCATCTTCGAACAGGTGCTGCTGCCGCCGCAGGAACGGCAGC
TGCCGGGCTGA

Upstream 100 bases:

>100_bases
GAAGGCTTCGTGGCAGCAGACATCCTGCCGTGGAGCGCAGCTCCGTCCTGCATCCGCGAGCGGGCTGTTCGGCGCATGCG
CGTTTGAGAGGTAGTTGCCG

Downstream 100 bases:

>100_bases
CCCAAGAAGGGGCGGGGAAGATCGGCACCCGTCCGGCTCATCCCATTATACGTTCAAGACATCAGGTCTGACCTGACCGC
ATCTAATACGTTCCGGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Domain Protein; Permease Protein; Transmembrane Protein; Transmembrane Permease Protein; Inner Membrane Protein YhhT; Inner Membrane Protein YdgG; AI-2 Transport Protein TqsA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDIAERTTAKRRRKREAAKEIALAEASAIVARKRDSIELAGSWSVIGLFVIACAAVVYAMEPILLPITLAVVVGIVLGRA
ADELARFGLPPIFGGLLLALFFLLGLSYLVNAILWPITEVAREAPRLVEGVIERILPYLQRFEWLNLVLARGTEEEAFAD
VIVKNAGPLIGGAAASLTPALVQTLIFLAALVLFLLGRVQLRSTIILAFPSREGRLTAIRVMNALEDALGHYFSTASLIY
LALGAVTMVVALVGGLAMPPLWGLFAFVSSFIPYLGVTFMTLALLVGGLMTHDALIVALAPATAFFFVHLAMENLLVPAI
LGQRFDINPFLIFVAIIFWTWMWGAVGAILAFPLSLIAMIIFEQVLLPPQERQLPG

Sequences:

>Translated_376_residues
MDIAERTTAKRRRKREAAKEIALAEASAIVARKRDSIELAGSWSVIGLFVIACAAVVYAMEPILLPITLAVVVGIVLGRA
ADELARFGLPPIFGGLLLALFFLLGLSYLVNAILWPITEVAREAPRLVEGVIERILPYLQRFEWLNLVLARGTEEEAFAD
VIVKNAGPLIGGAAASLTPALVQTLIFLAALVLFLLGRVQLRSTIILAFPSREGRLTAIRVMNALEDALGHYFSTASLIY
LALGAVTMVVALVGGLAMPPLWGLFAFVSSFIPYLGVTFMTLALLVGGLMTHDALIVALAPATAFFFVHLAMENLLVPAI
LGQRFDINPFLIFVAIIFWTWMWGAVGAILAFPLSLIAMIIFEQVLLPPQERQLPG
>Mature_376_residues
MDIAERTTAKRRRKREAAKEIALAEASAIVARKRDSIELAGSWSVIGLFVIACAAVVYAMEPILLPITLAVVVGIVLGRA
ADELARFGLPPIFGGLLLALFFLLGLSYLVNAILWPITEVAREAPRLVEGVIERILPYLQRFEWLNLVLARGTEEEAFAD
VIVKNAGPLIGGAAASLTPALVQTLIFLAALVLFLLGRVQLRSTIILAFPSREGRLTAIRVMNALEDALGHYFSTASLIY
LALGAVTMVVALVGGLAMPPLWGLFAFVSSFIPYLGVTFMTLALLVGGLMTHDALIVALAPATAFFFVHLAMENLLVPAI
LGQRFDINPFLIFVAIIFWTWMWGAVGAILAFPLSLIAMIIFEQVLLPPQERQLPG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787885, Length=330, Percent_Identity=23.6363636363636, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082271, Length=318, Percent_Identity=22.3270440251572, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40713; Mature: 40713

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00778 HIS_ACID_PHOSPHAT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIAERTTAKRRRKREAAKEIALAEASAIVARKRDSIELAGSWSVIGLFVIACAAVVYAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH
EPILLPITLAVVVGIVLGRAADELARFGLPPIFGGLLLALFFLLGLSYLVNAILWPITEV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREAPRLVEGVIERILPYLQRFEWLNLVLARGTEEEAFADVIVKNAGPLIGGAAASLTPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
LVQTLIFLAALVLFLLGRVQLRSTIILAFPSREGRLTAIRVMNALEDALGHYFSTASLIY
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LALGAVTMVVALVGGLAMPPLWGLFAFVSSFIPYLGVTFMTLALLVGGLMTHDALIVALA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PATAFFFVHLAMENLLVPAILGQRFDINPFLIFVAIIFWTWMWGAVGAILAFPLSLIAMI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFEQVLLPPQERQLPG
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDIAERTTAKRRRKREAAKEIALAEASAIVARKRDSIELAGSWSVIGLFVIACAAVVYAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH
EPILLPITLAVVVGIVLGRAADELARFGLPPIFGGLLLALFFLLGLSYLVNAILWPITEV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREAPRLVEGVIERILPYLQRFEWLNLVLARGTEEEAFADVIVKNAGPLIGGAAASLTPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
LVQTLIFLAALVLFLLGRVQLRSTIILAFPSREGRLTAIRVMNALEDALGHYFSTASLIY
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LALGAVTMVVALVGGLAMPPLWGLFAFVSSFIPYLGVTFMTLALLVGGLMTHDALIVALA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PATAFFFVHLAMENLLVPAILGQRFDINPFLIFVAIIFWTWMWGAVGAILAFPLSLIAMI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFEQVLLPPQERQLPG
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA