| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395513
Identifier: 150395513
GI number: 150395513
Start: 305070
End: 305621
Strand: Direct
Name: 150395513
Synonym: Smed_0286
Alternate gene names: NA
Gene position: 305070-305621 (Clockwise)
Preceding gene: 150395512
Following gene: 150395514
Centisome position: 8.07
GC content: 61.05
Gene sequence:
>552_bases ATGGCAATTTCCCCGCCCAGCGATCTGGTGATGGATGTCGTACGCGCGGCGGATCCGGCGGAGGTTCAAGAGGCCCAGGC GCGGCTCAAAGCCAACCGTGCCGCTTTCCAGGCGACCAGCCTTGCGGAAAACGGAGATGGGTTCGCGGCTGCGGTTTCGG TGCTCAACACCTCCGAGGGATCGAGCGGCCTTGGCGACATCAGCAACCGGGCCGAAGCGAAGAAGATCCCTGAGACCTAT CGGAAATTCGAGGCAATGGTCCTGCAGAATTTCGTGAAGTCCATGCTTCCGAGCGACAGCGAGAACGTCTACGGCAAAGG CACGTCCGGCGACATCTGGAAGAGCATGATGGCCGAGCAGATCGGCGATGTGCTTTCCAAGGGCGGTGGGATCGGGATCG CCGATCAGATGGTTGGAGACGACGCCGCCGGCCAGGTGAATGCCTCGCTCGATGGCGACAGTCGGAATCTCGCCGCCGGG ATGGTCCAGGAATATGAGCGCAAGGCGCTCGCGTCTTTCTTGCCCGATGACGAAAAGAAGAAACAGGCCTGA
Upstream 100 bases:
>100_bases AGTGGCTCGATCGACGCCCCAGCACGGGCATCATCTGGTTCACGAACATGGCGTTGCCCGGCGAACGAAGTGCCGGCCTC GGCCTTGAAAAGGATCTGAC
Downstream 100 bases:
>100_bases TGTCAGGCTCCAGGGCTCTAAGGGCCGGGGGCACGAGATTCACAATCAGCGGGTGAGGAGCACCTCCGGTGTTCCGCATC TCATACAAAATTGGAACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MAISPPSDLVMDVVRAADPAEVQEAQARLKANRAAFQATSLAENGDGFAAAVSVLNTSEGSSGLGDISNRAEAKKIPETY RKFEAMVLQNFVKSMLPSDSENVYGKGTSGDIWKSMMAEQIGDVLSKGGGIGIADQMVGDDAAGQVNASLDGDSRNLAAG MVQEYERKALASFLPDDEKKKQA
Sequences:
>Translated_183_residues MAISPPSDLVMDVVRAADPAEVQEAQARLKANRAAFQATSLAENGDGFAAAVSVLNTSEGSSGLGDISNRAEAKKIPETY RKFEAMVLQNFVKSMLPSDSENVYGKGTSGDIWKSMMAEQIGDVLSKGGGIGIADQMVGDDAAGQVNASLDGDSRNLAAG MVQEYERKALASFLPDDEKKKQA >Mature_182_residues AISPPSDLVMDVVRAADPAEVQEAQARLKANRAAFQATSLAENGDGFAAAVSVLNTSEGSSGLGDISNRAEAKKIPETYR KFEAMVLQNFVKSMLPSDSENVYGKGTSGDIWKSMMAEQIGDVLSKGGGIGIADQMVGDDAAGQVNASLDGDSRNLAAGM VQEYERKALASFLPDDEKKKQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19248; Mature: 19116
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISPPSDLVMDVVRAADPAEVQEAQARLKANRAAFQATSLAENGDGFAAAVSVLNTSEG CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC SSGLGDISNRAEAKKIPETYRKFEAMVLQNFVKSMLPSDSENVYGKGTSGDIWKSMMAEQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH IGDVLSKGGGIGIADQMVGDDAAGQVNASLDGDSRNLAAGMVQEYERKALASFLPDDEKK HHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH KQA CCC >Mature Secondary Structure AISPPSDLVMDVVRAADPAEVQEAQARLKANRAAFQATSLAENGDGFAAAVSVLNTSEG CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC SSGLGDISNRAEAKKIPETYRKFEAMVLQNFVKSMLPSDSENVYGKGTSGDIWKSMMAEQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH IGDVLSKGGGIGIADQMVGDDAAGQVNASLDGDSRNLAAGMVQEYERKALASFLPDDEKK HHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH KQA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA