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The map label for this gene is motB [H]

Identifier: 150395498

GI number: 150395498

Start: 290915

End: 292108

Strand: Direct

Name: motB [H]

Synonym: Smed_0271

Alternate gene names: 150395498

Gene position: 290915-292108 (Clockwise)

Preceding gene: 150395497

Following gene: 150395499

Centisome position: 7.69

GC content: 62.65

Gene sequence:

>1194_bases
ATGAGCGACGAAAGCCATCACAACGGCAAGAATGAAATCATCATCGTCCGGCGTTCCGCAGGTAGCCACGAAGGCCATCA
CGGCGGCGGATGGAAGATCGCATATGCCGATTTCATGACGGCAATGATGGCCTTCTTCCTGGTTATGTGGCTGATCAACG
CCGCGAATGAGGAGACCAAGGCGGCGATCGCCGCCTATTTCAATCCGGTGCAGCTGACCGATCAAAAGCCGGCGGAAAAA
GGGTTGAAGGATCCGGCCAAGGATGCGCAGGGCGAAAAGACGCAGCAACGCTCCAAGGTCGACGGCGACCAGACGAAGTC
GGGCGGCTCGGCAAAGTCCGGCGATCAGCTGACGGCGACTTCGGGCGAAGAGACCAAATATTCTGACGCCGACTTCTTCG
AAAATCCCTATTCGGTCCTGTCGGAGATCGCCCGCGAAGTAGGCCACGAAGCGAATATCAGCGTCAAGGGCGACGGCGGT
GCCGCCGAGTCGGGTCCTTCGACGGGCGCCGCCGGGGGCGAAGCCTATCGTGACCCCTTCGACCCGGACTTCTGGACCAA
GCAGGTGGAAGTGAAGGACGCCGGCAACACGGTCGAGAGCGACGTGGCGATTGCGGCGAATGCGGCCGCCGAAGAGAAGT
TCGTGCCCGAAGAAACATCCGCAAAAGCTTTACAGAACCAGGCGAATGCTGAGGACCGCACCGAGAACGAAGCGGCGGCC
GAAGACCGGCAGCAGGAGGCGGAAGCCTTGAAAGCCGAGATCGAAAGGGAGCTCGGCGGCGAGGCCGGGCGGCTTCTCGA
AGGCCTGGTGGTGGCGCCGGCCGAGGGCGGCCTGCTGGTGACGATCAGCGAGCAGACGGACGCGCCGATGTTCGCAGTCG
GATCCGCCGTTCCGCAAAAGGAGCTGGTGCTTGCGATGGAGAAAATCGGCAGGCTGCTCGCGCAGCGCCCTGGCGCCGTA
GCCGTCCGCGGCCATACCGACGGACGGCCGTTCAAGGACGGAACCTATGACAATTGGCGCCTTTCCGCAGCACGCGCCCA
GAGTGCCTATTACATGCTGGTCCGCGGCGGCTTGAAGGAAGAGCGCGTGAAACAGATCAGCGGCTTTGCCGACCGGCGGC
TCCAGGTGCCGAACGATCCTTACGCGCCCGCCAACCGCAGGATTGAAATCCTGCTGCAATCGGGCCAGGGCTGA

Upstream 100 bases:

>100_bases
ATGTCGAAAGCGGAGATGTCGACCTGACCGTCGAAGTAGGCGAGGCGATACTGGTGACGCGAATGGCCGCGTGGTCCGAT
ACTGTTCGCAAGGTTCTGGC

Downstream 100 bases:

>100_bases
AGAATGCTGAAGCGGCTCGGCACCATATTTGCGGCATCGGTCCTCGCCGTTCCCCTTGCGCTTGGCCCTGCCCGCGCCAG
CGGGACGGAAGAGCTCGCGC

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSDESHHNGKNEIIIVRRSAGSHEGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEETKAAIAAYFNPVQLTDQKPAEK
GLKDPAKDAQGEKTQQRSKVDGDQTKSGGSAKSGDQLTATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGG
AAESGPSTGAAGGEAYRDPFDPDFWTKQVEVKDAGNTVESDVAIAANAAAEEKFVPEETSAKALQNQANAEDRTENEAAA
EDRQQEAEALKAEIERELGGEAGRLLEGLVVAPAEGGLLVTISEQTDAPMFAVGSAVPQKELVLAMEKIGRLLAQRPGAV
AVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLKEERVKQISGFADRRLQVPNDPYAPANRRIEILLQSGQG

Sequences:

>Translated_397_residues
MSDESHHNGKNEIIIVRRSAGSHEGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEETKAAIAAYFNPVQLTDQKPAEK
GLKDPAKDAQGEKTQQRSKVDGDQTKSGGSAKSGDQLTATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGG
AAESGPSTGAAGGEAYRDPFDPDFWTKQVEVKDAGNTVESDVAIAANAAAEEKFVPEETSAKALQNQANAEDRTENEAAA
EDRQQEAEALKAEIERELGGEAGRLLEGLVVAPAEGGLLVTISEQTDAPMFAVGSAVPQKELVLAMEKIGRLLAQRPGAV
AVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLKEERVKQISGFADRRLQVPNDPYAPANRRIEILLQSGQG
>Mature_396_residues
SDESHHNGKNEIIIVRRSAGSHEGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEETKAAIAAYFNPVQLTDQKPAEKG
LKDPAKDAQGEKTQQRSKVDGDQTKSGGSAKSGDQLTATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGA
AESGPSTGAAGGEAYRDPFDPDFWTKQVEVKDAGNTVESDVAIAANAAAEEKFVPEETSAKALQNQANAEDRTENEAAAE
DRQQEAEALKAEIERELGGEAGRLLEGLVVAPAEGGLLVTISEQTDAPMFAVGSAVPQKELVLAMEKIGRLLAQRPGAVA
VRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLKEERVKQISGFADRRLQVPNDPYAPANRRIEILLQSGQG

Specific function: Probable integral membrane protein required for the rotation of the flagellar motor. Might be a linker that fastens the torque-generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=55, Percent_Identity=61.8181818181818, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 42623; Mature: 42492

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDESHHNGKNEIIIVRRSAGSHEGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEETK
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHH
AAIAAYFNPVQLTDQKPAEKGLKDPAKDAQGEKTQQRSKVDGDQTKSGGSAKSGDQLTAT
HHHHHHCCCEEECCCCCHHHCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEC
SGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAESGPSTGAAGGEAYRDPF
CCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
DPDFWTKQVEVKDAGNTVESDVAIAANAAAEEKFVPEETSAKALQNQANAEDRTENEAAA
CCCCCCEEEEEECCCCCHHCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHH
EDRQQEAEALKAEIERELGGEAGRLLEGLVVAPAEGGLLVTISEQTDAPMFAVGSAVPQK
HHHHHHHHHHHHHHHHHHCCHHHHHHHCEEEECCCCCEEEEECCCCCCCEEECCCCCCHH
ELVLAMEKIGRLLAQRPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLKE
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHCCEEEEEEECCCCH
ERVKQISGFADRRLQVPNDPYAPANRRIEILLQSGQG
HHHHHHHHHHHCCEECCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
SDESHHNGKNEIIIVRRSAGSHEGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEETK
CCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHH
AAIAAYFNPVQLTDQKPAEKGLKDPAKDAQGEKTQQRSKVDGDQTKSGGSAKSGDQLTAT
HHHHHHCCCEEECCCCCHHHCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEC
SGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAESGPSTGAAGGEAYRDPF
CCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
DPDFWTKQVEVKDAGNTVESDVAIAANAAAEEKFVPEETSAKALQNQANAEDRTENEAAA
CCCCCCEEEEEECCCCCHHCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHH
EDRQQEAEALKAEIERELGGEAGRLLEGLVVAPAEGGLLVTISEQTDAPMFAVGSAVPQK
HHHHHHHHHHHHHHHHHHCCHHHHHHHCEEEECCCCCEEEEECCCCCCCEEECCCCCCHH
ELVLAMEKIGRLLAQRPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRGGLKE
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHCCEEEEEEECCCCH
ERVKQISGFADRRLQVPNDPYAPANRRIEILLQSGQG
HHHHHHHHHHHCCEECCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8501040 [H]