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The map label for this gene is fliE

Identifier: 150395484

GI number: 150395484

Start: 278957

End: 279292

Strand: Direct

Name: fliE

Synonym: Smed_0257

Alternate gene names: 150395484

Gene position: 278957-279292 (Clockwise)

Preceding gene: 150395483

Following gene: 150395485

Centisome position: 7.38

GC content: 63.39

Gene sequence:

>336_bases
ATGATCGATGCAATTCAGTCCATAGGTGCGTTTTCGGCCGTCAAGGAGACCGAAGCCGCCGGTTCGAGCTCGTCCGCCTC
GCTCGCAACGCCGGGTACAGGCGCGGCCGCTCCTCAGGCGGGCAGCTTCGCGGAAGTCCTCGGAAACATGACCACGGATG
CCATTCGCTCGGTGAAATCGGCCGAGGGCGTCTCGCTCCAGGCGATCCGCGGGGAAGCGAATACGCGTGAGGTCGTCGAC
GCCGTGATGAGCGCCGAGCAGTCTCTCCAGACGGCGATCGCGATACGCGACAAAGTGGTCACCGCCTATCTCGAAATCGC
GCGCATGCAGATCTGA

Upstream 100 bases:

>100_bases
TGCGCGAGGCCAACCGCGCTTACGAGGCCAACCTGCAGACCATCAAGCAGGCGCGCGATCTCATCTCCCAGACAATCGAC
CTGTTGAGGGCTTCGCAATA

Downstream 100 bases:

>100_bases
GGAAAAGAGACATGAAGGCCCTTTCCATCGCCGCCACGGGAATGAATGCCCAGCAGCTGAACCTCGAAGTCATCGCGAAC
AACATCGCGAACATCAACAC

Product: flagellar hook-basal body protein FliE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MIDAIQSIGAFSAVKETEAAGSSSSASLATPGTGAAAPQAGSFAEVLGNMTTDAIRSVKSAEGVSLQAIRGEANTREVVD
AVMSAEQSLQTAIAIRDKVVTAYLEIARMQI

Sequences:

>Translated_111_residues
MIDAIQSIGAFSAVKETEAAGSSSSASLATPGTGAAAPQAGSFAEVLGNMTTDAIRSVKSAEGVSLQAIRGEANTREVVD
AVMSAEQSLQTAIAIRDKVVTAYLEIARMQI
>Mature_111_residues
MIDAIQSIGAFSAVKETEAAGSSSSASLATPGTGAAAPQAGSFAEVLGNMTTDAIRSVKSAEGVSLQAIRGEANTREVVD
AVMSAEQSLQTAIAIRDKVVTAYLEIARMQI

Specific function: Unknown

COG id: COG1677

COG function: function code NU; Flagellar hook-basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLIE_SINMW (A6U636)

Other databases:

- EMBL:   CP000738
- RefSeq:   YP_001325951.1
- STRING:   A6U636
- GeneID:   5321089
- GenomeReviews:   CP000738_GR
- KEGG:   smd:Smed_0257
- eggNOG:   COG1677
- HOGENOM:   HBG648608
- OMA:   NMASDAV
- ProtClustDB:   PRK00790
- BioCyc:   SMED366394:SMED_0257-MONOMER
- HAMAP:   MF_00724
- InterPro:   IPR001624

Pfam domain/function: PF02049 FliE

EC number: NA

Molecular weight: Translated: 11288; Mature: 11288

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDAIQSIGAFSAVKETEAAGSSSSASLATPGTGAAAPQAGSFAEVLGNMTTDAIRSVKS
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHH
AEGVSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDAIQSIGAFSAVKETEAAGSSSSASLATPGTGAAAPQAGSFAEVLGNMTTDAIRSVKS
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHH
AEGVSLQAIRGEANTREVVDAVMSAEQSLQTAIAIRDKVVTAYLEIARMQI
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA