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The map label for this gene is flgB [H]

Identifier: 150395482

GI number: 150395482

Start: 278152

End: 278532

Strand: Direct

Name: flgB [H]

Synonym: Smed_0255

Alternate gene names: 150395482

Gene position: 278152-278532 (Clockwise)

Preceding gene: 150395481

Following gene: 150395483

Centisome position: 7.35

GC content: 59.32

Gene sequence:

>381_bases
ATGGAACCGATTCAGCTTTTCGAACTCGCGTCGCGGCAGGCCCAGTGGCTCTCCGTTCGCCAGAACGTCGTGGCGGGCAA
CATCGCAAATGCCAACACGCCGCATTACAAGGCGAGAGACGTCCAGCCCTTCGAAAGCGTGCTCCAGAACACCGGGGTGC
AAATGGCCGCGACCCATCGCGCCCATTTTACCGAGAGTGCGGATGCCGCGCAGGTCACAGAGGTCAGCGCTCTCGACGAT
GTCGCCGTACAGCAATCCGGCAACACGGTCGCGCTCGAAGAAGAATTGATGAAGACCGGTGCGATCAAGCGCGACTACGA
GCTCAATGCCGGGCTCGTGAAGTCCTTTCACCGGATGATACTCATGACGGTACGGAAGTAA

Upstream 100 bases:

>100_bases
CGCCTGCCGGCACCTCCTTCACTGCAGTCCTTCCGCACTTCCCGACAAGTCCCACGCAAGATTACCGCCCTAAGGTCGGC
CTCATCAGCAGGAGCTCTTG

Downstream 100 bases:

>100_bases
GTGCAATGGACCCTTTGACTTCGGCCCTCAAGGTCTCGGCCTCCGGTCTCCAGGCGGAATCGACGCGCTTGCGCATCGTC
TCGGAAAACATCGCCAATGC

Product: flagellar basal body rod protein FlgB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MEPIQLFELASRQAQWLSVRQNVVAGNIANANTPHYKARDVQPFESVLQNTGVQMAATHRAHFTESADAAQVTEVSALDD
VAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKSFHRMILMTVRK

Sequences:

>Translated_126_residues
MEPIQLFELASRQAQWLSVRQNVVAGNIANANTPHYKARDVQPFESVLQNTGVQMAATHRAHFTESADAAQVTEVSALDD
VAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKSFHRMILMTVRK
>Mature_126_residues
MEPIQLFELASRQAQWLSVRQNVVAGNIANANTPHYKARDVQPFESVLQNTGVQMAATHRAHFTESADAAQVTEVSALDD
VAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKSFHRMILMTVRK

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 13952; Mature: 13952

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPIQLFELASRQAQWLSVRQNVVAGNIANANTPHYKARDVQPFESVLQNTGVQMAATHR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHH
AHFTESADAAQVTEVSALDDVAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKSFHRMI
HHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LMTVRK
HHHHCC
>Mature Secondary Structure
MEPIQLFELASRQAQWLSVRQNVVAGNIANANTPHYKARDVQPFESVLQNTGVQMAATHR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHH
AHFTESADAAQVTEVSALDDVAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKSFHRMI
HHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LMTVRK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9161424; 11743193; 11743194 [H]