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The map label for this gene is ahyR [H]

Identifier: 150395470

GI number: 150395470

Start: 267436

End: 268173

Strand: Direct

Name: ahyR [H]

Synonym: Smed_0243

Alternate gene names: 150395470

Gene position: 267436-268173 (Clockwise)

Preceding gene: 150395469

Following gene: 150395471

Centisome position: 7.07

GC content: 59.76

Gene sequence:

>738_bases
ATGGAGATGTCGCGGTCAGACGCAGTCTGGTCTTCGGAGACCGCTGCGCGGCGAATGTATGGTCGCAGAATATCGAGGGA
ACAACTGATCCGAAGGCTGGGCGAGTTGGCTTCGGGTACGGGCCTCGGCAACGGACTGGCCGTGCTGACGGAATATGTCG
GCGCCACGCATTACCTTCTCGCCCGGCACGATGTTTCGCAGGACGGTGGCCTCGATTTTGTCGTCTGTTCCGACTGGCCG
TTCGACATCGTCCGGCGCCTCTCCGGCATCATCGCGGGGCTCAATTCCAAGACCACGGAACTGGAAAAATGCCGCGCACA
GCTGCAGCCGGTCTTCCATGCGATGCCCGACGATATCGGTTTGCCACGAGGCGTCAGCCGCAGCTATTGCGCTGTCACCT
TCAGCATCGGGCCGACGCGGTTTTCCTTGATGCTGCTCTTCCCCGAGGACGTTATCCTCTCGCAAGACGCACTGCGCGAT
GTCGCGGTGCTTGCCGGATACGTCGCCAGTCACAAGATCAAGGCCGACGTGCGGCATGATCGGGAATGCGAGTTGACCGA
ACGTGAGCTCGAATGTCTGTTCTGGATTGCCGAAGGCAAGACCAGCGACGAAATCGCGGTCATACTCGGGATCTCCCGCA
ACACGATAAACAATTACATCACCAGTGTGATGCGCAAGACGGCGACGCGAACGAGGTCCGAGGCGATCGCTCACGCGGTG
CGCAACAATCTGGTTTAG

Upstream 100 bases:

>100_bases
ATTCGCTTGGTGGCAAAAATACCGGCGAAGCCGGCTGTCGAGGACGACAGGGCAAGCGTGAGATTTCAAGGCGTCGAATT
CGGCACGGGGGCTGAAAGTT

Downstream 100 bases:

>100_bases
GAGCGGGAAAATGACTTATCTCGTGACCGAAAACCGTGGCTGCGACGCTGGCCGGCCGGGCCGAAACGGGCGCGCGGCGC
AAGCGGCGGGGCTCGTGACG

Product: regulatory protein LuxR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MEMSRSDAVWSSETAARRMYGRRISREQLIRRLGELASGTGLGNGLAVLTEYVGATHYLLARHDVSQDGGLDFVVCSDWP
FDIVRRLSGIIAGLNSKTTELEKCRAQLQPVFHAMPDDIGLPRGVSRSYCAVTFSIGPTRFSLMLLFPEDVILSQDALRD
VAVLAGYVASHKIKADVRHDRECELTERELECLFWIAEGKTSDEIAVILGISRNTINNYITSVMRKTATRTRSEAIAHAV
RNNLV

Sequences:

>Translated_245_residues
MEMSRSDAVWSSETAARRMYGRRISREQLIRRLGELASGTGLGNGLAVLTEYVGATHYLLARHDVSQDGGLDFVVCSDWP
FDIVRRLSGIIAGLNSKTTELEKCRAQLQPVFHAMPDDIGLPRGVSRSYCAVTFSIGPTRFSLMLLFPEDVILSQDALRD
VAVLAGYVASHKIKADVRHDRECELTERELECLFWIAEGKTSDEIAVILGISRNTINNYITSVMRKTATRTRSEAIAHAV
RNNLV
>Mature_245_residues
MEMSRSDAVWSSETAARRMYGRRISREQLIRRLGELASGTGLGNGLAVLTEYVGATHYLLARHDVSQDGGLDFVVCSDWP
FDIVRRLSGIIAGLNSKTTELEKCRAQLQPVFHAMPDDIGLPRGVSRSYCAVTFSIGPTRFSLMLLFPEDVILSQDALRD
VAVLAGYVASHKIKADVRHDRECELTERELECLFWIAEGKTSDEIAVILGISRNTINNYITSVMRKTATRTRSEAIAHAV
RNNLV

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 27244; Mature: 27244

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMSRSDAVWSSETAARRMYGRRISREQLIRRLGELASGTGLGNGLAVLTEYVGATHYLL
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHH
ARHDVSQDGGLDFVVCSDWPFDIVRRLSGIIAGLNSKTTELEKCRAQLQPVFHAMPDDIG
HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
LPRGVSRSYCAVTFSIGPTRFSLMLLFPEDVILSQDALRDVAVLAGYVASHKIKADVRHD
CCCCCCCCEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RECELTERELECLFWIAEGKTSDEIAVILGISRNTINNYITSVMRKTATRTRSEAIAHAV
CCCCHHHHHEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNNLV
HHCCC
>Mature Secondary Structure
MEMSRSDAVWSSETAARRMYGRRISREQLIRRLGELASGTGLGNGLAVLTEYVGATHYLL
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHH
ARHDVSQDGGLDFVVCSDWPFDIVRRLSGIIAGLNSKTTELEKCRAQLQPVFHAMPDDIG
HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
LPRGVSRSYCAVTFSIGPTRFSLMLLFPEDVILSQDALRDVAVLAGYVASHKIKADVRHD
CCCCCCCCEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RECELTERELECLFWIAEGKTSDEIAVILGISRNTINNYITSVMRKTATRTRSEAIAHAV
CCCCHHHHHEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNNLV
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]