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The map label for this gene is rhaM [H]

Identifier: 150395456

GI number: 150395456

Start: 253875

End: 254189

Strand: Direct

Name: rhaM [H]

Synonym: Smed_0229

Alternate gene names: 150395456

Gene position: 253875-254189 (Clockwise)

Preceding gene: 150395455

Following gene: 150395457

Centisome position: 6.71

GC content: 59.68

Gene sequence:

>315_bases
ATGGAAAAATACGCCTTCCGCATGCGACTCCATCCCGGCAAGGCCGCCGAATACCAGGCGCGTCACGACGCGATCCGGCC
GGAGCTGGTGGCGCTTCTGAAGGACGCCGGGATTTCCGATTATTCGATCCACCTCGATGAGGAGAACGATCTGCTCTTCG
GTGTGCTCTGGCGGTCCGACGATCACAAGATGGCCGATCTTCCTTCGCACCCGGTGATGCGGAAATGGTGGGCGCATATG
GCCGATATCATGGAGACGCATGCCGACAACGAGCCGGTCGCCGCACCGCTCAAGACGGTCTTTCATCTGAGATGA

Upstream 100 bases:

>100_bases
GTCATGTCGATCTTCATCGGCCTGCTCCTGATCTCGGTCATCGCGCTGCCGATCCTCTGGCAGCGTGCCCGCCGCCGTCC
TGTTCATTGAGGTGGAAGTC

Downstream 100 bases:

>100_bases
CAATGAAGACTGTGGCCGTCATCGACATCGGAAAGACGAATGCCAAGATCGCCTTGGTCGAACTCGAGCGCTTCGAGGAG
ATTGCCGTGCGGAAGGCGGG

Product: L-rhamnose 1-epimerase

Products: NA

Alternate protein names: Rhamnose 1-epimerase; Type-3 mutarotase [H]

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MEKYAFRMRLHPGKAAEYQARHDAIRPELVALLKDAGISDYSIHLDEENDLLFGVLWRSDDHKMADLPSHPVMRKWWAHM
ADIMETHADNEPVAAPLKTVFHLR

Sequences:

>Translated_104_residues
MEKYAFRMRLHPGKAAEYQARHDAIRPELVALLKDAGISDYSIHLDEENDLLFGVLWRSDDHKMADLPSHPVMRKWWAHM
ADIMETHADNEPVAAPLKTVFHLR
>Mature_104_residues
MEKYAFRMRLHPGKAAEYQARHDAIRPELVALLKDAGISDYSIHLDEENDLLFGVLWRSDDHKMADLPSHPVMRKWWAHM
ADIMETHADNEPVAAPLKTVFHLR

Specific function: Involved in the anomeric conversion of L-rhamnose [H]

COG id: COG3254

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose mutarotase family [H]

Homologues:

Organism=Escherichia coli, GI1790335, Length=103, Percent_Identity=38.8349514563107, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013448
- InterPro:   IPR008000 [H]

Pfam domain/function: PF05336 DUF718 [H]

EC number: NA

Molecular weight: Translated: 12087; Mature: 12087

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYAFRMRLHPGKAAEYQARHDAIRPELVALLKDAGISDYSIHLDEENDLLFGVLWRSD
CCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECC
DHKMADLPSHPVMRKWWAHMADIMETHADNEPVAAPLKTVFHLR
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MEKYAFRMRLHPGKAAEYQARHDAIRPELVALLKDAGISDYSIHLDEENDLLFGVLWRSD
CCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECC
DHKMADLPSHPVMRKWWAHMADIMETHADNEPVAAPLKTVFHLR
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]