| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150395377
Identifier: 150395377
GI number: 150395377
Start: 168038
End: 168445
Strand: Direct
Name: 150395377
Synonym: Smed_0150
Alternate gene names: NA
Gene position: 168038-168445 (Clockwise)
Preceding gene: 150395376
Following gene: 150395378
Centisome position: 4.44
GC content: 59.07
Gene sequence:
>408_bases ATGGCCAATGCCCAATGCGCTTGCGGCGCACTTAAACTGATGGTCAGCGAGCCGCCACAATTGACTGCGGTGTGCCACTG CCTGGCTTGCCAACGGCGAACCGGTGCGCCCTTCAGCGCCAATGCGTTCTACTCGGCTGAATGTGTCGAGATCTCGGGAG CCTCTACGGAATTCATTCGTATCGCAGAGAGCGGTCGCAAGGTCCGTATGTACTTTTGCCCGATTTGCGGCTCGACCGTC TATTGGAGAGCCGATGGCGCTCCGTCCTGGATCGGGGTCGCGGTAGGTTCTTTCGCCGAACCGGCCTTCGCGCCACCCTC CATGTCGGTATTCGAACAATCGAGACATAAATGGGTGCAGCTTGACGACGCGCTCGAGCACTTCGAAGGCCTTCCAACCG GGCATTAG
Upstream 100 bases:
>100_bases CTCAGCCCCCTCGCATCGGCCGCCGCAATTGAATTGCGGCTCGGCCCTGCGCTTCAGCCCTCATCATCATAATTTCACCC TGCGAGCGGGAGGAGTTTCC
Downstream 100 bases:
>100_bases CATTGTATGGACGCTATCGGCGCTCTCTTTTGCCTTGCGGCGGTTTAGTCTAAGGAAGCAGGCGAAAGGCATCGGCGGCA AGCGATGCGAACTTGAGGAA
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Lipoprotein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MANAQCACGALKLMVSEPPQLTAVCHCLACQRRTGAPFSANAFYSAECVEISGASTEFIRIAESGRKVRMYFCPICGSTV YWRADGAPSWIGVAVGSFAEPAFAPPSMSVFEQSRHKWVQLDDALEHFEGLPTGH
Sequences:
>Translated_135_residues MANAQCACGALKLMVSEPPQLTAVCHCLACQRRTGAPFSANAFYSAECVEISGASTEFIRIAESGRKVRMYFCPICGSTV YWRADGAPSWIGVAVGSFAEPAFAPPSMSVFEQSRHKWVQLDDALEHFEGLPTGH >Mature_134_residues ANAQCACGALKLMVSEPPQLTAVCHCLACQRRTGAPFSANAFYSAECVEISGASTEFIRIAESGRKVRMYFCPICGSTVY WRADGAPSWIGVAVGSFAEPAFAPPSMSVFEQSRHKWVQLDDALEHFEGLPTGH
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14592; Mature: 14461
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANAQCACGALKLMVSEPPQLTAVCHCLACQRRTGAPFSANAFYSAECVEISGASTEFIR CCCCCCCHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECEEEEEECCCCCEEEE IAESGRKVRMYFCPICGSTVYWRADGAPSWIGVAVGSFAEPAFAPPSMSVFEQSRHKWVQ EECCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCEEE LDDALEHFEGLPTGH HHHHHHHHCCCCCCC >Mature Secondary Structure ANAQCACGALKLMVSEPPQLTAVCHCLACQRRTGAPFSANAFYSAECVEISGASTEFIR CCCCCCHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECEEEEEECCCCCEEEE IAESGRKVRMYFCPICGSTVYWRADGAPSWIGVAVGSFAEPAFAPPSMSVFEQSRHKWVQ EECCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCEEE LDDALEHFEGLPTGH HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA