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The map label for this gene is ynjF [H]

Identifier: 150395360

GI number: 150395360

Start: 146248

End: 146865

Strand: Direct

Name: ynjF [H]

Synonym: Smed_0132

Alternate gene names: 150395360

Gene position: 146248-146865 (Clockwise)

Preceding gene: 150395357

Following gene: 150395362

Centisome position: 3.87

GC content: 61.33

Gene sequence:

>618_bases
ATGCTGGATGGCGCGCTGCGCAGACGTCTGGACCCGGTTCTGGACAGGCTCGGTGCCGCACTTGCCGAGCGCGGAATAGG
CGCCGATTCCATTACGATCCTCGGCCTTTGCCTTGGCCTTGCGGCAGCCCTTCTCGTTGGTCTCGGCGCATATCACTCCG
CCGCCATTTTGATCCTCGTGAGCCGCTTCTGCGACGGCCTTGATGGCGCCGTCGCCCGTGCGAGCCGGAGAACGGATTTC
GGCGGCTTCCTCGACATCGTCCTCGATTTCGCCTTTTACGGCGCCGTGCCACTGGGTTTCATTGCCGCCGATCCGGGCGC
AAACGGGCTTGCCGGCGGCTTTTTGCTGTTCGCCTTTTACGTCAACGGGGCGAGCTTCCTCGCCTATGCGGTGATGGCCG
AGAAGCGCGCCATGACCACCATGATACGCGGTGCGAAGTCGTTATATTTCACCACCGGGCTTGCGGAGGCGACCGAGACG
ATCGTGTTCTTCCTGCTCTCGTGCCTTTTCCCGGCGTGGTTCCCGGTACTGGCGTCGGTTTTCGCGCTTGTTTGTCTCTA
TACCGCGCTGTCGCGGATCATTCTCGCAAGACTGACATTTCCGAAAGACGTGCAATGA

Upstream 100 bases:

>100_bases
GCACCCATATAAGCACAGTTTCGACACACAGGATTCCTGTGACAAGCACGGGAATGATGGAATCGACGACCGGTTCTCTT
CAAGCGTGGGGGCAATGGCT

Downstream 100 bases:

>100_bases
AAACGCCCGCTGCCGAGTGAACCGGGGCAGTTCAGGAGGGCAGCGGGCTGCGTGGCCTTGCAGGGGCTTAGGCCGTGACG
CTCCTCAGTGCCTTCGCGAA

Product: CDP-alcohol phosphatidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLDGALRRRLDPVLDRLGAALAERGIGADSITILGLCLGLAAALLVGLGAYHSAAILILVSRFCDGLDGAVARASRRTDF
GGFLDIVLDFAFYGAVPLGFIAADPGANGLAGGFLLFAFYVNGASFLAYAVMAEKRAMTTMIRGAKSLYFTTGLAEATET
IVFFLLSCLFPAWFPVLASVFALVCLYTALSRIILARLTFPKDVQ

Sequences:

>Translated_205_residues
MLDGALRRRLDPVLDRLGAALAERGIGADSITILGLCLGLAAALLVGLGAYHSAAILILVSRFCDGLDGAVARASRRTDF
GGFLDIVLDFAFYGAVPLGFIAADPGANGLAGGFLLFAFYVNGASFLAYAVMAEKRAMTTMIRGAKSLYFTTGLAEATET
IVFFLLSCLFPAWFPVLASVFALVCLYTALSRIILARLTFPKDVQ
>Mature_205_residues
MLDGALRRRLDPVLDRLGAALAERGIGADSITILGLCLGLAAALLVGLGAYHSAAILILVSRFCDGLDGAVARASRRTDF
GGFLDIVLDFAFYGAVPLGFIAADPGANGLAGGFLLFAFYVNGASFLAYAVMAEKRAMTTMIRGAKSLYFTTGLAEATET
IVFFLLSCLFPAWFPVLASVFALVCLYTALSRIILARLTFPKDVQ

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=205, Percent_Identity=46.8292682926829, Blast_Score=159, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 21687; Mature: 21687

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDGALRRRLDPVLDRLGAALAERGIGADSITILGLCLGLAAALLVGLGAYHSAAILILV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRFCDGLDGAVARASRRTDFGGFLDIVLDFAFYGAVPLGFIAADPGANGLAGGFLLFAFY
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH
VNGASFLAYAVMAEKRAMTTMIRGAKSLYFTTGLAEATETIVFFLLSCLFPAWFPVLASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALVCLYTALSRIILARLTFPKDVQ
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLDGALRRRLDPVLDRLGAALAERGIGADSITILGLCLGLAAALLVGLGAYHSAAILILV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRFCDGLDGAVARASRRTDFGGFLDIVLDFAFYGAVPLGFIAADPGANGLAGGFLLFAFY
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH
VNGASFLAYAVMAEKRAMTTMIRGAKSLYFTTGLAEATETIVFFLLSCLFPAWFPVLASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALVCLYTALSRIILARLTFPKDVQ
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]