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The map label for this gene is yqjF [H]

Identifier: 150395327

GI number: 150395327

Start: 110674

End: 111111

Strand: Direct

Name: yqjF [H]

Synonym: Smed_0099

Alternate gene names: 150395327

Gene position: 110674-111111 (Clockwise)

Preceding gene: 150395324

Following gene: 150395330

Centisome position: 2.93

GC content: 61.42

Gene sequence:

>438_bases
ATGTCTCAGAACGTCATCGTGCTCATCGGGCGCATTCTTCTCTCGATCATCTTTATCACTTCCGGCTTCGGAAAACTTAC
GGATCCGTCCGGAACGGCCGGTATGATCACCAATGCCGGCTGGCCCGCCGCCACGGCGCTTGCATATCTCGCCGGTCTCT
TCGAGCTCGTCGCCGGCCTTGCGATCCTCGTCGGCTTTCAGACGCGCATCGCCTCTTATCTGCTCGCCGCTTTCTGCCTT
GTGACGGCGTTTGTCTTTCACAGCGGCGCGATCAATGTCCCGGATTTCCCGCCGGCGGCAAACGGTCTCCTGACGCTCTT
CAACCAGATCATGATGATGAAGAACGTCACCATTGCCGGCGCGTTCCTCGTGCTGGCGGGCTTCGGTCCGGGCTCGCTAT
CGCTCGACGCGCGTGCCGGAACGGCCGCCACGGCCTGA

Upstream 100 bases:

>100_bases
TTCCAGATTGTGAACGATCTGTCGCCGCGCGGGCGGCTGGAGGATTTCGAAGAACGTGATATCGCTGCTGCCAACACGTT
TCCCAACAGGAGCCTCGCGC

Downstream 100 bases:

>100_bases
CCGTCCAATCAACCGCGACAGAGGGGCCCGTCGGCACCGCCGGCCGGCCCCTTTGCGTTGGCTCCAGGATGCGAAGCCTT
TCAGTCAGGGATAGATCACG

Product: DoxX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSQNVIVLIGRILLSIIFITSGFGKLTDPSGTAGMITNAGWPAATALAYLAGLFELVAGLAILVGFQTRIASYLLAAFCL
VTAFVFHSGAINVPDFPPAANGLLTLFNQIMMMKNVTIAGAFLVLAGFGPGSLSLDARAGTAATA

Sequences:

>Translated_145_residues
MSQNVIVLIGRILLSIIFITSGFGKLTDPSGTAGMITNAGWPAATALAYLAGLFELVAGLAILVGFQTRIASYLLAAFCL
VTAFVFHSGAINVPDFPPAANGLLTLFNQIMMMKNVTIAGAFLVLAGFGPGSLSLDARAGTAATA
>Mature_144_residues
SQNVIVLIGRILLSIIFITSGFGKLTDPSGTAGMITNAGWPAATALAYLAGLFELVAGLAILVGFQTRIASYLLAAFCLV
TAFVFHSGAINVPDFPPAANGLLTLFNQIMMMKNVTIAGAFLVLAGFGPGSLSLDARAGTAATA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=134, Percent_Identity=43.2835820895522, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI145693171, Length=137, Percent_Identity=37.956204379562, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14838; Mature: 14707

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNVIVLIGRILLSIIFITSGFGKLTDPSGTAGMITNAGWPAATALAYLAGLFELVAGL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AILVGFQTRIASYLLAAFCLVTAFVFHSGAINVPDFPPAANGLLTLFNQIMMMKNVTIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH
AFLVLAGFGPGSLSLDARAGTAATA
HHHHHCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure 
SQNVIVLIGRILLSIIFITSGFGKLTDPSGTAGMITNAGWPAATALAYLAGLFELVAGL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AILVGFQTRIASYLLAAFCLVTAFVFHSGAINVPDFPPAANGLLTLFNQIMMMKNVTIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH
AFLVLAGFGPGSLSLDARAGTAATA
HHHHHCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]