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The map label for this gene is yccW [C]

Identifier: 150395252

GI number: 150395252

Start: 19875

End: 21032

Strand: Direct

Name: yccW [C]

Synonym: Smed_0024

Alternate gene names: 150395252

Gene position: 19875-21032 (Clockwise)

Preceding gene: 150395250

Following gene: 150395253

Centisome position: 0.53

GC content: 66.58

Gene sequence:

>1158_bases
GTGAAGGAAAAAGATCGGCGATCGAAGAACGCCTCCGTGACGGCGGCGAAGAGCCGGGGCGCCGAGGCGCGCGGCGGCCG
TCATGAGCAAAGGCTGCCGCCAGCAAAAAGCGCAGGGCCCGCGGCGAGGACCGGATCAAAGACGGGGGCAGGAGGGCCAT
CGCTGAAACCGGCACCGCGCAAGGCCGAGCGGACCTCCGCCCAGAACAGCGCCCCGTTGCGCCGCCTTGAACTCAGGACC
GGGGAGAAGCCTGCCGAGACGGTGCCGCTGATCCTCGCGACCGCCGCCACCGGCGGCTATCACCTGATCGATAGCGGCGA
TGGCGAGAAGCTCGAGCAATATGGCCCCTATCGCATCGTCCGTCCGGAGGCCCAGGCGCTCTGGCCGAAGGCCCTGTCTG
CATCCATCTGGGAAAAAGCCGATGCGGTCTTCACCGGCGATACGGAAGAGGACGGGATGGGTCGCTGGCGGTTCCCGGGG
GATGTTCTCGGCGAGACCTGGCCGATGCAGCTCCTGGACACGGATTTCCTCGGCCGGTTCACATCCTTCCGCCATGTCGG
CGTCTTTCCGGAACAGCTCGCCCACTGGTCGTGGATGCGGGACCAGGTTGCCGGCGCCGGCCGGCCCCTGAAGGTTCTCA
ATCTCTTCGGCTATACCGGCGTTGCTTCGCTCATCGCGGCGAAGGCGGGTGCGGAAGTAACCCATGTCGATGCCTCGAAA
AAAGCGATCGGCTGGGCGCGCGAGAACCAGGCAATGGCGCGAGCCGAGAAGCTGCCGATCCGCTGGATCTGCGACGATGC
CATGAAATTCATCCAACGGGAGGAGCGGCGCGGCAGCCGCTACGACGTCATCCTCACCGACCCGCCGAAGTTCGGCCGCG
GCCCGAACGGCGAGGTTTGGCAACTGTTCGATCATCTCGCGGCGATGCTGGACGTCTGCCGCGAGATCCTGTCACCGGAC
GCGCGGGGCCTCGTGCTCACCGCCTATTCGATCCGTGCCAGCTTCTATTCGATTCACGAGCTCATGCGGGAGACCATGCG
CGGGCGCGGCGGGCGGGTGGAATCGGGCGAACTCATCATTCGCGAGGGCGGTCTCGACGGCGCCAGGCCGGGCCGGGCGC
TCTCGACCTCCCTCTTCAGCCGCTGGGTACCGAAATGA

Upstream 100 bases:

>100_bases
GCTATTTGCAGGCTGAGCAAGCCCGCGTCCGGTTCGGATCGGGAGGCAGGGGTCGGGAACGGCTGCGCCGAATGGTTGAG
CAACGTCCAAGGATCAGCGC

Downstream 100 bases:

>100_bases
CCAACGACAGAAGCGACCATGGCACCCCACGCGTAGGGCAGGTGAAGGAGGTCACCAGCCTCACCAACCCGATCATCAAG
GATATCCGGGCGCTGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Oxidoreductase; SAM-Dependent Methyltransferase-Like Protein; N6-Adenine-Specific DNA Methylase; LOW QUALITY PROTEIN SAM Dependent Methyltransferase; TRNA/RRNA Methyltransferase; SAM-Dependant Methyltransferase; SAM-Dependent Methyltransferase Protein; Sam Dependent Methyltransferase

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKEKDRRSKNASVTAAKSRGAEARGGRHEQRLPPAKSAGPAARTGSKTGAGGPSLKPAPRKAERTSAQNSAPLRRLELRT
GEKPAETVPLILATAATGGYHLIDSGDGEKLEQYGPYRIVRPEAQALWPKALSASIWEKADAVFTGDTEEDGMGRWRFPG
DVLGETWPMQLLDTDFLGRFTSFRHVGVFPEQLAHWSWMRDQVAGAGRPLKVLNLFGYTGVASLIAAKAGAEVTHVDASK
KAIGWARENQAMARAEKLPIRWICDDAMKFIQREERRGSRYDVILTDPPKFGRGPNGEVWQLFDHLAAMLDVCREILSPD
ARGLVLTAYSIRASFYSIHELMRETMRGRGGRVESGELIIREGGLDGARPGRALSTSLFSRWVPK

Sequences:

>Translated_385_residues
MKEKDRRSKNASVTAAKSRGAEARGGRHEQRLPPAKSAGPAARTGSKTGAGGPSLKPAPRKAERTSAQNSAPLRRLELRT
GEKPAETVPLILATAATGGYHLIDSGDGEKLEQYGPYRIVRPEAQALWPKALSASIWEKADAVFTGDTEEDGMGRWRFPG
DVLGETWPMQLLDTDFLGRFTSFRHVGVFPEQLAHWSWMRDQVAGAGRPLKVLNLFGYTGVASLIAAKAGAEVTHVDASK
KAIGWARENQAMARAEKLPIRWICDDAMKFIQREERRGSRYDVILTDPPKFGRGPNGEVWQLFDHLAAMLDVCREILSPD
ARGLVLTAYSIRASFYSIHELMRETMRGRGGRVESGELIIREGGLDGARPGRALSTSLFSRWVPK
>Mature_385_residues
MKEKDRRSKNASVTAAKSRGAEARGGRHEQRLPPAKSAGPAARTGSKTGAGGPSLKPAPRKAERTSAQNSAPLRRLELRT
GEKPAETVPLILATAATGGYHLIDSGDGEKLEQYGPYRIVRPEAQALWPKALSASIWEKADAVFTGDTEEDGMGRWRFPG
DVLGETWPMQLLDTDFLGRFTSFRHVGVFPEQLAHWSWMRDQVAGAGRPLKVLNLFGYTGVASLIAAKAGAEVTHVDASK
KAIGWARENQAMARAEKLPIRWICDDAMKFIQREERRGSRYDVILTDPPKFGRGPNGEVWQLFDHLAAMLDVCREILSPD
ARGLVLTAYSIRASFYSIHELMRETMRGRGGRVESGELIIREGGLDGARPGRALSTSLFSRWVPK

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42328; Mature: 42328

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKDRRSKNASVTAAKSRGAEARGGRHEQRLPPAKSAGPAARTGSKTGAGGPSLKPAPR
CCCHHHHCCCCCEEEHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KAERTSAQNSAPLRRLELRTGEKPAETVPLILATAATGGYHLIDSGDGEKLEQYGPYRIV
HHHHHCCCCCCCHHHHHHHCCCCCCHHHCEEEEEECCCCEEEEECCCCHHHHHCCCEEEE
RPEAQALWPKALSASIWEKADAVFTGDTEEDGMGRWRFPGDVLGETWPMQLLDTDFLGRF
CCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH
TSFRHVGVFPEQLAHWSWMRDQVAGAGRPLKVLNLFGYTGVASLIAAKAGAEVTHVDASK
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCH
KAIGWARENQAMARAEKLPIRWICDDAMKFIQREERRGSRYDVILTDPPKFGRGPNGEVW
HHHCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHH
QLFDHLAAMLDVCREILSPDARGLVLTAYSIRASFYSIHELMRETMRGRGGRVESGELII
HHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
REGGLDGARPGRALSTSLFSRWVPK
EECCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKEKDRRSKNASVTAAKSRGAEARGGRHEQRLPPAKSAGPAARTGSKTGAGGPSLKPAPR
CCCHHHHCCCCCEEEHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KAERTSAQNSAPLRRLELRTGEKPAETVPLILATAATGGYHLIDSGDGEKLEQYGPYRIV
HHHHHCCCCCCCHHHHHHHCCCCCCHHHCEEEEEECCCCEEEEECCCCHHHHHCCCEEEE
RPEAQALWPKALSASIWEKADAVFTGDTEEDGMGRWRFPGDVLGETWPMQLLDTDFLGRF
CCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH
TSFRHVGVFPEQLAHWSWMRDQVAGAGRPLKVLNLFGYTGVASLIAAKAGAEVTHVDASK
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCH
KAIGWARENQAMARAEKLPIRWICDDAMKFIQREERRGSRYDVILTDPPKFGRGPNGEVW
HHHCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHH
QLFDHLAAMLDVCREILSPDARGLVLTAYSIRASFYSIHELMRETMRGRGGRVESGELII
HHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
REGGLDGARPGRALSTSLFSRWVPK
EECCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA