Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401910

Identifier: 150401910

GI number: 150401910

Start: 1549782

End: 1551590

Strand: Reverse

Name: 150401910

Synonym: Maeo_1488

Alternate gene names: NA

Gene position: 1551590-1549782 (Counterclockwise)

Preceding gene: 150401913

Following gene: 150401909

Centisome position: 98.86

GC content: 29.02

Gene sequence:

>1809_bases
ATGCTTGAACCAATTTATTATAATATTGGAAGAAGTTGTAAAGAAACTTATTTTAAAAAGGATTACGACAATAAAAACAT
AAATATTACTCCAAAATTAATCGACGACAATATTATTAAAAATATCAAACGACCATTATTAAAAATACCTTTTGATGCAC
CTGAAAAAGTTGCAAACTATATTTTTGAACAAAATAAAGATAAAATAAAAGGAACGATTAAATTAAGCGATAACGATAAC
GATAATAACGATAATAACGATAATAACGATAGTGATAAAGATAATAATAGTATAAATTATTATATATTAAATCTCGGAAA
ATATATTGAAAAAATCAACGAATTAACCGAAGAATTAAAAAATACTGATTTAATAATAATTGCAGATGGAAGAAGATTAA
TTAATAGAAAAGAACTTTTATTAATATCTGAATTAAGAAATATAATTTCCCCAAACACTGCAATATATTTCCCAACAGCA
TTGCCAAATGAAATTCCACTGCTAACATATATGGGTGTAGATTACTTTGATAATTCTTCGGCATCATATTATGCTTCAAA
AGGATACAAATTTACAAAAAATAGAATAATGGAAACAACCATACAATTTAATGAATTGGTAGAGCACAATAAATCTATTA
TAAGGGAGCTCCTTGAAGAAACAAAATACTGTATTAAAGAGGGTAGTTTAAGAAATTTAGTTGAAGAAACCAGTATTTCA
AATCCATACCTTAGGGGCAATTATAAGAGATTTAATCCTGATGTAAGAAATATCCCTCTATCCAGTGGGAAAAAAATAAT
TGTATCCATTGACGAAACTACAATTCCAGAGGTAAAAAAATACACTGAAAGGCTTGGCAATTATGAAGCTTTTACAAATA
TTGTTGTATTACTTCCTTGTTCGTCAAAAAAACCATATTCGTTCTCAAAATCTCACCAATACTTTGTAAATGCAATTAGA
TCTTCAAATACAGTAGTTGAAGAAGTTGTATTGACCTCCCCATATGGTGTAGTTCCAAGAGCTTTGGAGGGAATAGTAAA
TTATGATATTCCTGTTGTTGGGTCATGGAGCTCCGAGGAAATTGAATTTATTAACAGGCACTTAAAAACTTATTTAGATA
ATACGGATAATAAATTTGGAACTATATCTGTAATAGCTCACCTTCCAAAACATTATTATGAAATATTGGATAAAAATTTA
ATAGAAAAATATGATATAATATCTACGGTAGAAGATGACCGACCCACGACCAATAATTCGCTTGCTACATTAAAAGATAC
CCTCAAAGAAATTAGTGCAGATAAATACGGTATTGATAATAACAAAGAGAATAATAAAAATGAACGAGATAATAAGGATA
ATAATGCCCCAGTAAAAGCCAATAGGCCCAGTATAAGAAAACAGGTGATGCACAACTACCAGCAACTTGCAAAATTCCAA
TTTGGCAGTAATTTCATACCTGATGATACAGTAATTAAAGGAAGGCATAAAAAGTTTTTTGCGAAAATAAATAATAAATT
AACTCAGATATGTTCATTAAATTATGAAAATGGGCTTTTTGTGCTAACCTATGAGGGTGGAAAATTATTGGGAAAAAATA
AATGGGTAGAAGTTAATTTTAAGGCTAAAAAAGGCTCATTATTTGCACCTGGTTTTAAGGATTGTGATGAAAATATATCC
GTAGGAGATGAAATCGTAATAATTTATGAGGGGGAAGTAATTGGTGTAGGTAGGGCATCAATGAGTGGGGCAGAAATGAA
AAAAGCTAAAAATGGGGCATTGTTAAATATTAGACACTGTAAAAAATAA

Upstream 100 bases:

>100_bases
TTGAATTCAAAATCTTCGATTTTGTTCAATATCCGAAGGATATTGTAGATTTTCCCCTGTAAAAAAATATATGAATAATC
AATATATAATGTGATAAAAA

Downstream 100 bases:

>100_bases
CATATGATGCGTGTTCAGGATTGTCATTAAAATTAAAACTACAAATAACAGGACCATTATGATTTTGTAGTTAAATTTTT
AATATTTTATGATTGTTATC

Product: PUA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MLEPIYYNIGRSCKETYFKKDYDNKNINITPKLIDDNIIKNIKRPLLKIPFDAPEKVANYIFEQNKDKIKGTIKLSDNDN
DNNDNNDNNDSDKDNNSINYYILNLGKYIEKINELTEELKNTDLIIIADGRRLINRKELLLISELRNIISPNTAIYFPTA
LPNEIPLLTYMGVDYFDNSSASYYASKGYKFTKNRIMETTIQFNELVEHNKSIIRELLEETKYCIKEGSLRNLVEETSIS
NPYLRGNYKRFNPDVRNIPLSSGKKIIVSIDETTIPEVKKYTERLGNYEAFTNIVVLLPCSSKKPYSFSKSHQYFVNAIR
SSNTVVEEVVLTSPYGVVPRALEGIVNYDIPVVGSWSSEEIEFINRHLKTYLDNTDNKFGTISVIAHLPKHYYEILDKNL
IEKYDIISTVEDDRPTTNNSLATLKDTLKEISADKYGIDNNKENNKNERDNKDNNAPVKANRPSIRKQVMHNYQQLAKFQ
FGSNFIPDDTVIKGRHKKFFAKINNKLTQICSLNYENGLFVLTYEGGKLLGKNKWVEVNFKAKKGSLFAPGFKDCDENIS
VGDEIVIIYEGEVIGVGRASMSGAEMKKAKNGALLNIRHCKK

Sequences:

>Translated_602_residues
MLEPIYYNIGRSCKETYFKKDYDNKNINITPKLIDDNIIKNIKRPLLKIPFDAPEKVANYIFEQNKDKIKGTIKLSDNDN
DNNDNNDNNDSDKDNNSINYYILNLGKYIEKINELTEELKNTDLIIIADGRRLINRKELLLISELRNIISPNTAIYFPTA
LPNEIPLLTYMGVDYFDNSSASYYASKGYKFTKNRIMETTIQFNELVEHNKSIIRELLEETKYCIKEGSLRNLVEETSIS
NPYLRGNYKRFNPDVRNIPLSSGKKIIVSIDETTIPEVKKYTERLGNYEAFTNIVVLLPCSSKKPYSFSKSHQYFVNAIR
SSNTVVEEVVLTSPYGVVPRALEGIVNYDIPVVGSWSSEEIEFINRHLKTYLDNTDNKFGTISVIAHLPKHYYEILDKNL
IEKYDIISTVEDDRPTTNNSLATLKDTLKEISADKYGIDNNKENNKNERDNKDNNAPVKANRPSIRKQVMHNYQQLAKFQ
FGSNFIPDDTVIKGRHKKFFAKINNKLTQICSLNYENGLFVLTYEGGKLLGKNKWVEVNFKAKKGSLFAPGFKDCDENIS
VGDEIVIIYEGEVIGVGRASMSGAEMKKAKNGALLNIRHCKK
>Mature_602_residues
MLEPIYYNIGRSCKETYFKKDYDNKNINITPKLIDDNIIKNIKRPLLKIPFDAPEKVANYIFEQNKDKIKGTIKLSDNDN
DNNDNNDNNDSDKDNNSINYYILNLGKYIEKINELTEELKNTDLIIIADGRRLINRKELLLISELRNIISPNTAIYFPTA
LPNEIPLLTYMGVDYFDNSSASYYASKGYKFTKNRIMETTIQFNELVEHNKSIIRELLEETKYCIKEGSLRNLVEETSIS
NPYLRGNYKRFNPDVRNIPLSSGKKIIVSIDETTIPEVKKYTERLGNYEAFTNIVVLLPCSSKKPYSFSKSHQYFVNAIR
SSNTVVEEVVLTSPYGVVPRALEGIVNYDIPVVGSWSSEEIEFINRHLKTYLDNTDNKFGTISVIAHLPKHYYEILDKNL
IEKYDIISTVEDDRPTTNNSLATLKDTLKEISADKYGIDNNKENNKNERDNKDNNAPVKANRPSIRKQVMHNYQQLAKFQ
FGSNFIPDDTVIKGRHKKFFAKINNKLTQICSLNYENGLFVLTYEGGKLLGKNKWVEVNFKAKKGSLFAPGFKDCDENIS
VGDEIVIIYEGEVIGVGRASMSGAEMKKAKNGALLNIRHCKK

Specific function: Unknown

COG id: COG1549

COG function: function code J; Queuine tRNA-ribosyltransferases, contain PUA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR002616 [H]

Pfam domain/function: PF01472 PUA; PF01702 TGT [H]

EC number: NA

Molecular weight: Translated: 68973; Mature: 68973

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEPIYYNIGRSCKETYFKKDYDNKNINITPKLIDDNIIKNIKRPLLKIPFDAPEKVANY
CCCCEEHHCCCHHHHHHHHCCCCCCCCEEEHEECCHHHHHHHHHHHEECCCCCHHHHHHH
IFEQNKDKIKGTIKLSDNDNDNNDNNDNNDSDKDNNSINYYILNLGKYIEKINELTEELK
HHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHC
NTDLIIIADGRRLINRKELLLISELRNIISPNTAIYFPTALPNEIPLLTYMGVDYFDNSS
CCCEEEEECCHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEECCCC
ASYYASKGYKFTKNRIMETTIQFNELVEHNKSIIRELLEETKYCIKEGSLRNLVEETSIS
CCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
NPYLRGNYKRFNPDVRNIPLSSGKKIIVSIDETTIPEVKKYTERLGNYEAFTNIVVLLPC
CCEEECCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHCCCEEEEEEC
SSKKPYSFSKSHQYFVNAIRSSNTVVEEVVLTSPYGVVPRALEGIVNYDIPVVGSWSSEE
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCHHH
IEFINRHLKTYLDNTDNKFGTISVIAHLPKHYYEILDKNLIEKYDIISTVEDDRPTTNNS
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LATLKDTLKEISADKYGIDNNKENNKNERDNKDNNAPVKANRPSIRKQVMHNYQQLAKFQ
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FGSNFIPDDTVIKGRHKKFFAKINNKLTQICSLNYENGLFVLTYEGGKLLGKNKWVEVNF
CCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCEEEEEE
KAKKGSLFAPGFKDCDENISVGDEIVIIYEGEVIGVGRASMSGAEMKKAKNGALLNIRHC
EECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCHHHHHCCCCCEEEECCC
KK
CC
>Mature Secondary Structure
MLEPIYYNIGRSCKETYFKKDYDNKNINITPKLIDDNIIKNIKRPLLKIPFDAPEKVANY
CCCCEEHHCCCHHHHHHHHCCCCCCCCEEEHEECCHHHHHHHHHHHEECCCCCHHHHHHH
IFEQNKDKIKGTIKLSDNDNDNNDNNDNNDSDKDNNSINYYILNLGKYIEKINELTEELK
HHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHC
NTDLIIIADGRRLINRKELLLISELRNIISPNTAIYFPTALPNEIPLLTYMGVDYFDNSS
CCCEEEEECCHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEECCCC
ASYYASKGYKFTKNRIMETTIQFNELVEHNKSIIRELLEETKYCIKEGSLRNLVEETSIS
CCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
NPYLRGNYKRFNPDVRNIPLSSGKKIIVSIDETTIPEVKKYTERLGNYEAFTNIVVLLPC
CCEEECCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHCCCEEEEEEC
SSKKPYSFSKSHQYFVNAIRSSNTVVEEVVLTSPYGVVPRALEGIVNYDIPVVGSWSSEE
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCHHH
IEFINRHLKTYLDNTDNKFGTISVIAHLPKHYYEILDKNLIEKYDIISTVEDDRPTTNNS
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LATLKDTLKEISADKYGIDNNKENNKNERDNKDNNAPVKANRPSIRKQVMHNYQQLAKFQ
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FGSNFIPDDTVIKGRHKKFFAKINNKLTQICSLNYENGLFVLTYEGGKLLGKNKWVEVNF
CCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCEEEEEE
KAKKGSLFAPGFKDCDENISVGDEIVIIYEGEVIGVGRASMSGAEMKKAKNGALLNIRHC
EECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCHHHHHCCCCCEEEECCC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]