| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401908
Identifier: 150401908
GI number: 150401908
Start: 1547900
End: 1548820
Strand: Reverse
Name: 150401908
Synonym: Maeo_1486
Alternate gene names: NA
Gene position: 1548820-1547900 (Counterclockwise)
Preceding gene: 150401909
Following gene: 150401907
Centisome position: 98.68
GC content: 34.09
Gene sequence:
>921_bases ATGGGAAAAATTGATAACATTGAAAAAGTATCGTATAAAAAAATAATTGCTATGGCAGACGAACAATTAAACATAGTGGA GTTAATAGAAGAACATCCATGCCCCAGTGGTTCTCAGTGGATAATATATCAATACCAAAGAACATCTCCACTTATTATAT CTGCATGGCGAAATGGAAATAAACATCATTTTATCCTAAATATTGATAAATGTAAATTAAATCTTGTGCCTTCATTAAGT GCCGCAGGTATCGAGAAAGTATTTATCGAGGATAATAATGTGCATATCGTTTATGCGGGTTTAGCTGGCGCAGGGGTTGG CGTAGAATTGAGAAGCAATGCGAAAAATGTAATCAATACAATATTATATGAAAAAGGAGGAGGCTCCAAACTCGGAAAGG GTGCAGTAATTACTCCAAAAATGGAAAAAGTTATAGTTGGAATTGATGACACTGACACAAAAGAAGAGGGAGCAACTTGG GTTCTTGCAAATGAAATTGGCAATATTGTGGAAAAAGAAGGTTGGGGATATTATATAGACCATACCATAATCCAACTTTA TCCAGGAAATCCAAATAAAACCCAGAACTGTGTTTCAATTGGTTTAACATTTGCAATTTATCCGGAGTATAAATATAAAC TTAAAGAATTAATTAAAAATCAATTGAAAGAAAAAAGTTTATCCGATAAAACTGCGGTTGCCGTGTATTATGGAATTACA CCTTCAAAAAGCATGAAATTATTTACCTGTAAAGCAAAAAGAGGAATGGTTACTGTTGAAGAGGCAAAATCTGTGGCAAT GCGAAATAATATTGATATTATTAAAGTATTTGAAAAGGACGGAGGAATAATTGGAGCAGTTGCGGCACTTGGACTTGCAG AGCATCATGAACAGGCAGCTAAATTGCCAGATGATTTATAA
Upstream 100 bases:
>100_bases GTATAATATTTGGCTGCAAAAAGTCCTGAAAATACACACACTAGCCCAATACATATAATAACCACATATAAAAATGAAAA TAAAATAGGTGTGAAAAAAT
Downstream 100 bases:
>100_bases ATTTTTAACCTCATTCCGCAAGAAGTCCCCGTCCATAAGGACAGAATAATTCACGATATGCCCAAAAAAATAATAAATGA AAATATATTAATATAATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGKIDNIEKVSYKKIIAMADEQLNIVELIEEHPCPSGSQWIIYQYQRTSPLIISAWRNGNKHHFILNIDKCKLNLVPSLS AAGIEKVFIEDNNVHIVYAGLAGAGVGVELRSNAKNVINTILYEKGGGSKLGKGAVITPKMEKVIVGIDDTDTKEEGATW VLANEIGNIVEKEGWGYYIDHTIIQLYPGNPNKTQNCVSIGLTFAIYPEYKYKLKELIKNQLKEKSLSDKTAVAVYYGIT PSKSMKLFTCKAKRGMVTVEEAKSVAMRNNIDIIKVFEKDGGIIGAVAALGLAEHHEQAAKLPDDL
Sequences:
>Translated_306_residues MGKIDNIEKVSYKKIIAMADEQLNIVELIEEHPCPSGSQWIIYQYQRTSPLIISAWRNGNKHHFILNIDKCKLNLVPSLS AAGIEKVFIEDNNVHIVYAGLAGAGVGVELRSNAKNVINTILYEKGGGSKLGKGAVITPKMEKVIVGIDDTDTKEEGATW VLANEIGNIVEKEGWGYYIDHTIIQLYPGNPNKTQNCVSIGLTFAIYPEYKYKLKELIKNQLKEKSLSDKTAVAVYYGIT PSKSMKLFTCKAKRGMVTVEEAKSVAMRNNIDIIKVFEKDGGIIGAVAALGLAEHHEQAAKLPDDL >Mature_305_residues GKIDNIEKVSYKKIIAMADEQLNIVELIEEHPCPSGSQWIIYQYQRTSPLIISAWRNGNKHHFILNIDKCKLNLVPSLSA AGIEKVFIEDNNVHIVYAGLAGAGVGVELRSNAKNVINTILYEKGGGSKLGKGAVITPKMEKVIVGIDDTDTKEEGATWV LANEIGNIVEKEGWGYYIDHTIIQLYPGNPNKTQNCVSIGLTFAIYPEYKYKLKELIKNQLKEKSLSDKTAVAVYYGITP SKSMKLFTCKAKRGMVTVEEAKSVAMRNNIDIIKVFEKDGGIIGAVAALGLAEHHEQAAKLPDDL
Specific function: Unknown
COG id: COG1571
COG function: function code R; Predicted DNA-binding protein containing a Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013696 - InterPro: IPR017674 [H]
Pfam domain/function: PF08489 DUF1743 [H]
EC number: NA
Molecular weight: Translated: 33733; Mature: 33602
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIDNIEKVSYKKIIAMADEQLNIVELIEEHPCPSGSQWIIYQYQRTSPLIISAWRNGN CCCCCCCHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCC KHHFILNIDKCKLNLVPSLSAAGIEKVFIEDNNVHIVYAGLAGAGVGVELRSNAKNVINT EEEEEEEECCEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEECCCHHHHHHH ILYEKGGGSKLGKGAVITPKMEKVIVGIDDTDTKEEGATWVLANEIGNIVEKEGWGYYID HEEECCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEE HTIIQLYPGNPNKTQNCVSIGLTFAIYPEYKYKLKELIKNQLKEKSLSDKTAVAVYYGIT EEEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC PSKSMKLFTCKAKRGMVTVEEAKSVAMRNNIDIIKVFEKDGGIIGAVAALGLAEHHEQAA CCCCEEEEEEECCCCEEEHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHH KLPDDL CCCCCC >Mature Secondary Structure GKIDNIEKVSYKKIIAMADEQLNIVELIEEHPCPSGSQWIIYQYQRTSPLIISAWRNGN CCCCCCHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCC KHHFILNIDKCKLNLVPSLSAAGIEKVFIEDNNVHIVYAGLAGAGVGVELRSNAKNVINT EEEEEEEECCEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEECCCHHHHHHH ILYEKGGGSKLGKGAVITPKMEKVIVGIDDTDTKEEGATWVLANEIGNIVEKEGWGYYID HEEECCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEE HTIIQLYPGNPNKTQNCVSIGLTFAIYPEYKYKLKELIKNQLKEKSLSDKTAVAVYYGIT EEEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC PSKSMKLFTCKAKRGMVTVEEAKSVAMRNNIDIIKVFEKDGGIIGAVAALGLAEHHEQAA CCCCEEEEEEECCCCEEEHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHH KLPDDL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]