| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is dys [H]
Identifier: 150401895
GI number: 150401895
Start: 1532594
End: 1533622
Strand: Direct
Name: dys [H]
Synonym: Maeo_1473
Alternate gene names: 150401895
Gene position: 1532594-1533622 (Clockwise)
Preceding gene: 150401893
Following gene: 150401897
Centisome position: 97.65
GC content: 31.29
Gene sequence:
>1029_bases ATGCGAGAAAAAGGTGAAAAAATTACTCAACCAAAAGATATAATATTAAAAAAAAGTGATGAAATTAATGGGTTAGAAGT AGAAGGTCCATCATTGGACAACGATATTGATTTAAAAGATATAATTACAAATTATTATCAAAAAATAGGTTTTCAGGCAA CGGCTGTTGGAAATGCCATAAATATATGGAAAAATATTGATAAAATAAAGCAGACAGACGAAATAACTGTTTTTATGGGA TATACTTCAAATATGGTTTCATCTGGATTGCGAGAAATAATATCATATTTGGCAAAGCATAATAAAATAGATGTAATAGT TACCACAGCAGGAGGGGTTGAGGAAGATTTTATAAAATGCTTAAAACCTTTTATCGTGGGAGAGTGGGATTTAGACGGAA ATTATTTACGGGAAAAAGGAATTAATAGAATTGGGAATATATATGTTCCAAATGATAGATATATTGAATTTGAAACCTAT ATGACGGAATTTTTTGAGCTATTGGACGAAAAACAGCAACAAACCAATAATATTATATCGGCACAGGAGTTTTGTTATGA ATTGGGTAAATTTATGGATAGAAAATTGCCCGATGAAGCAAAAGAAAAATCCATTATTTACTGGGCATATAAAAATAATA TTCCAATGTTTTGCCCTGCCATAACAGATGGTTCTATTGGAGATATGCTTTATTTCTATAAAATAGAAAGAAAATCAAAT TTAAAAATAGATATTGCCGAAGATATTGTAAAATTAAATGATATTGCTGTAAATTCTAAAAAAACAGCCTGTATTGTGTT GGGGGGCTCACTTCCAAAACACAGCATAATAAATGCAAATTTGTTCAGAGAGGGTACAGATTATGCTATATATATTACTA CGGCCATTCCAAATGATGGCTCACTTAGTGGGGCTCCACCAGAAGAAGGAATTTCATGGGGGAAAATTCAGTCAAAAGCA GATTTCGTTGAAGTGTGGGCCGACGCCACAATAGTATTTCCATTAATTGTTTATGGAGTATTTAAATAA
Upstream 100 bases:
>100_bases ATACTATAAAATGTGGCGGTTATTTTATTGTTGTATAACTATATTAGTTATATATTGAAAACAATAATAAATAATAATAA AAAAAATAATAATTTATTTT
Downstream 100 bases:
>100_bases TTGGAGCTCCAATTCTTGGAGCCCCCAATAAATCTATAATTTATTTAAATCATTATGGGTATTCACATTTACAAAAGATT TATGAGTTTCATCTATTTCA
Product: putative deoxyhypusine synthase
Products: NA
Alternate protein names: DHS [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MREKGEKITQPKDIILKKSDEINGLEVEGPSLDNDIDLKDIITNYYQKIGFQATAVGNAINIWKNIDKIKQTDEITVFMG YTSNMVSSGLREIISYLAKHNKIDVIVTTAGGVEEDFIKCLKPFIVGEWDLDGNYLREKGINRIGNIYVPNDRYIEFETY MTEFFELLDEKQQQTNNIISAQEFCYELGKFMDRKLPDEAKEKSIIYWAYKNNIPMFCPAITDGSIGDMLYFYKIERKSN LKIDIAEDIVKLNDIAVNSKKTACIVLGGSLPKHSIINANLFREGTDYAIYITTAIPNDGSLSGAPPEEGISWGKIQSKA DFVEVWADATIVFPLIVYGVFK
Sequences:
>Translated_342_residues MREKGEKITQPKDIILKKSDEINGLEVEGPSLDNDIDLKDIITNYYQKIGFQATAVGNAINIWKNIDKIKQTDEITVFMG YTSNMVSSGLREIISYLAKHNKIDVIVTTAGGVEEDFIKCLKPFIVGEWDLDGNYLREKGINRIGNIYVPNDRYIEFETY MTEFFELLDEKQQQTNNIISAQEFCYELGKFMDRKLPDEAKEKSIIYWAYKNNIPMFCPAITDGSIGDMLYFYKIERKSN LKIDIAEDIVKLNDIAVNSKKTACIVLGGSLPKHSIINANLFREGTDYAIYITTAIPNDGSLSGAPPEEGISWGKIQSKA DFVEVWADATIVFPLIVYGVFK >Mature_342_residues MREKGEKITQPKDIILKKSDEINGLEVEGPSLDNDIDLKDIITNYYQKIGFQATAVGNAINIWKNIDKIKQTDEITVFMG YTSNMVSSGLREIISYLAKHNKIDVIVTTAGGVEEDFIKCLKPFIVGEWDLDGNYLREKGINRIGNIYVPNDRYIEFETY MTEFFELLDEKQQQTNNIISAQEFCYELGKFMDRKLPDEAKEKSIIYWAYKNNIPMFCPAITDGSIGDMLYFYKIERKSN LKIDIAEDIVKLNDIAVNSKKTACIVLGGSLPKHSIINANLFREGTDYAIYITTAIPNDGSLSGAPPEEGISWGKIQSKA DFVEVWADATIVFPLIVYGVFK
Specific function: Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine
COG id: COG1899
COG function: function code O; Deoxyhypusine synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoxyhypusine synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503325, Length=348, Percent_Identity=41.9540229885057, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI7108338, Length=348, Percent_Identity=35.632183908046, Blast_Score=201, Evalue=8e-52, Organism=Homo sapiens, GI7108340, Length=348, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17536927, Length=327, Percent_Identity=43.7308868501529, Blast_Score=276, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6321859, Length=352, Percent_Identity=41.4772727272727, Blast_Score=271, Evalue=1e-73, Organism=Drosophila melanogaster, GI45550569, Length=357, Percent_Identity=45.0980392156863, Blast_Score=294, Evalue=5e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002773 - InterPro: IPR022899 [H]
Pfam domain/function: PF01916 DS [H]
EC number: =2.5.1.46 [H]
Molecular weight: Translated: 38732; Mature: 38732
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREKGEKITQPKDIILKKSDEINGLEVEGPSLDNDIDLKDIITNYYQKIGFQATAVGNAI CCCCCCCCCCCHHEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCEEECCCCHH NIWKNIDKIKQTDEITVFMGYTSNMVSSGLREIISYLAKHNKIDVIVTTAGGVEEDFIKC HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH LKPFIVGEWDLDGNYLREKGINRIGNIYVPNDRYIEFETYMTEFFELLDEKQQQTNNIIS HHHHEEEEECCCCHHHHHHCHHHHCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCHH AQEFCYELGKFMDRKLPDEAKEKSIIYWAYKNNIPMFCPAITDGSIGDMLYFYKIERKSN HHHHHHHHHHHHHHCCCCCHHHCCEEEEEEECCCCEEEECCCCCCCCCEEEEEEEECCCC LKIDIAEDIVKLNDIAVNSKKTACIVLGGSLPKHSIINANLFREGTDYAIYITTAIPNDG CEEEHHHHHHHHHHEEECCCCCEEEEECCCCCCCCEEECHHEECCCCEEEEEEEECCCCC SLSGAPPEEGISWGKIQSKADFVEVWADATIVFPLIVYGVFK CCCCCCCHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCC >Mature Secondary Structure MREKGEKITQPKDIILKKSDEINGLEVEGPSLDNDIDLKDIITNYYQKIGFQATAVGNAI CCCCCCCCCCCHHEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCEEECCCCHH NIWKNIDKIKQTDEITVFMGYTSNMVSSGLREIISYLAKHNKIDVIVTTAGGVEEDFIKC HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH LKPFIVGEWDLDGNYLREKGINRIGNIYVPNDRYIEFETYMTEFFELLDEKQQQTNNIIS HHHHEEEEECCCCHHHHHHCHHHHCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCHH AQEFCYELGKFMDRKLPDEAKEKSIIYWAYKNNIPMFCPAITDGSIGDMLYFYKIERKSN HHHHHHHHHHHHHHCCCCCHHHCCEEEEEEECCCCEEEECCCCCCCCCEEEEEEEECCCC LKIDIAEDIVKLNDIAVNSKKTACIVLGGSLPKHSIINANLFREGTDYAIYITTAIPNDG CEEEHHHHHHHHHHEEECCCCCEEEEECCCCCCCCEEECHHEECCCCEEEEEEEECCCCC SLSGAPPEEGISWGKIQSKADFVEVWADATIVFPLIVYGVFK CCCCCCCHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA