| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401876
Identifier: 150401876
GI number: 150401876
Start: 1512550
End: 1513854
Strand: Reverse
Name: 150401876
Synonym: Maeo_1454
Alternate gene names: NA
Gene position: 1513854-1512550 (Counterclockwise)
Preceding gene: 150401884
Following gene: 150401875
Centisome position: 96.45
GC content: 27.82
Gene sequence:
>1305_bases ATGATAAAAAATGTAGCACTAATTTTTCCAAACAAATTTAAAGGTGGCATATCCAGTTTAGCTATGCAAATATTACATCA TCATCTAAATAGCTACAACGATGTAAATTGCGATATGTATTTTATGGAAAATTATAAGGATATAAAAAATAAAGATGCTA TAATTATAACACTTCAATATGAAAATGATTATTTTAATGTAATTAATATAATAAATAATTTAAAACCAAGAAATCCAAAT GCTATTTTTATTGGTGGTGGTCCTTGTGCTATGGCAAACCCAATGCCATTGAATAATTATTTTGATGCCTTTGTTGTAGG GGAAATAGAGGGAACAAATATAATGTATGATTTAATTAACAAGGAGCCCGTAGAAAATGGAGTATATTATCCAAAATTAA ACGATTTTGATACTGTAAAAAGAATATATCCAAAATTATTTGATATTCAAGATTACCCATTATGCCAATTTACTCACCCG TCTGGAGCTTATGGGGAAGCTTTTTTGTTGGAACTGGGAAGAGGTTGCCCAAGAAGATGTAAATTTTGTATGGCAAAAAA TATATATCGCCCACCACGATTTAAAAAAATAGAGGATTTAAAATATATTGCAGAGGAAGGGCTAAAACATACACCAGTAA ATAAAATAGCTCTTATAAGTCCATCTGTTGGAGATTATAAATATATAGTTGATTTATGTCATCATATAAAAGATATAAAA GAAAATATATCAATATCTCCCTCCTCATTAAGGGCCGACACCATAACAGAAGAATTATTAAAAATCCTTGACCTAAAAAC TCTCACAATAGCACCAGAAGCCGGAAGTGAGAGTTTAAGGAAATTTATTAAAAAAGATATTTCGGAAGACGATATTTTTA ATGCCTTAAATATAGCAAAAGATAACAGAATAGATAAAGTAAAGCTTTATTATATGGTGGGACTACCCAATGAAACAGAA GAGGACATTGAAGAAATCATAAAATTATCTCAAATAGTTAAAAAAGATTTTAGGAAGGTTGAAGTTAGTGTAAATCCATT CATACCAAAACCTAAAACTGAATTTGAAAATGAACCATTTGATTTAAACTCAAAAAATACAATAAAATATATTGAAAAAT CGTTAAAAAAATCAAATATAAAAGTATCTTATGAGAATTTTAATTCTATGATTGTGCAATGTGTTTTATGTCGTGGAGAT AGTGATTTAGGGGAGATTATAGAACAATATAATAAACCAGTGCAATTTTTGAAGTATTTGAAAAAAGAAGAATTTTTAAA TAATTATTTGGAGAGGATTGAATAA
Upstream 100 bases:
>100_bases CTGACTTTGTGATGAAAGATGGGCGAGCTGACACCGTTTTTTTTAAAAACTGTTTTGAATTTTATAATTTTATTAATATT CTCTATTTTTTTGTGATATC
Downstream 100 bases:
>100_bases AAAAGTTTATTCATTTTATTTATGATATATTTTTTTATTTAATATTTATATATATTCTATAAATAATGTTTTATATAGTT TAAATTTCATATATTATATT
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MIKNVALIFPNKFKGGISSLAMQILHHHLNSYNDVNCDMYFMENYKDIKNKDAIIITLQYENDYFNVINIINNLKPRNPN AIFIGGGPCAMANPMPLNNYFDAFVVGEIEGTNIMYDLINKEPVENGVYYPKLNDFDTVKRIYPKLFDIQDYPLCQFTHP SGAYGEAFLLELGRGCPRRCKFCMAKNIYRPPRFKKIEDLKYIAEEGLKHTPVNKIALISPSVGDYKYIVDLCHHIKDIK ENISISPSSLRADTITEELLKILDLKTLTIAPEAGSESLRKFIKKDISEDDIFNALNIAKDNRIDKVKLYYMVGLPNETE EDIEEIIKLSQIVKKDFRKVEVSVNPFIPKPKTEFENEPFDLNSKNTIKYIEKSLKKSNIKVSYENFNSMIVQCVLCRGD SDLGEIIEQYNKPVQFLKYLKKEEFLNNYLERIE
Sequences:
>Translated_434_residues MIKNVALIFPNKFKGGISSLAMQILHHHLNSYNDVNCDMYFMENYKDIKNKDAIIITLQYENDYFNVINIINNLKPRNPN AIFIGGGPCAMANPMPLNNYFDAFVVGEIEGTNIMYDLINKEPVENGVYYPKLNDFDTVKRIYPKLFDIQDYPLCQFTHP SGAYGEAFLLELGRGCPRRCKFCMAKNIYRPPRFKKIEDLKYIAEEGLKHTPVNKIALISPSVGDYKYIVDLCHHIKDIK ENISISPSSLRADTITEELLKILDLKTLTIAPEAGSESLRKFIKKDISEDDIFNALNIAKDNRIDKVKLYYMVGLPNETE EDIEEIIKLSQIVKKDFRKVEVSVNPFIPKPKTEFENEPFDLNSKNTIKYIEKSLKKSNIKVSYENFNSMIVQCVLCRGD SDLGEIIEQYNKPVQFLKYLKKEEFLNNYLERIE >Mature_434_residues MIKNVALIFPNKFKGGISSLAMQILHHHLNSYNDVNCDMYFMENYKDIKNKDAIIITLQYENDYFNVINIINNLKPRNPN AIFIGGGPCAMANPMPLNNYFDAFVVGEIEGTNIMYDLINKEPVENGVYYPKLNDFDTVKRIYPKLFDIQDYPLCQFTHP SGAYGEAFLLELGRGCPRRCKFCMAKNIYRPPRFKKIEDLKYIAEEGLKHTPVNKIALISPSVGDYKYIVDLCHHIKDIK ENISISPSSLRADTITEELLKILDLKTLTIAPEAGSESLRKFIKKDISEDDIFNALNIAKDNRIDKVKLYYMVGLPNETE EDIEEIIKLSQIVKKDFRKVEVSVNPFIPKPKTEFENEPFDLNSKNTIKYIEKSLKKSNIKVSYENFNSMIVQCVLCRGD SDLGEIIEQYNKPVQFLKYLKKEEFLNNYLERIE
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 50175; Mature: 50175
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNVALIFPNKFKGGISSLAMQILHHHLNSYNDVNCDMYFMENYKDIKNKDAIIITLQY CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHCCCCCEEEEEEEE ENDYFNVINIINNLKPRNPNAIFIGGGPCAMANPMPLNNYFDAFVVGEIEGTNIMYDLIN CCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCC KEPVENGVYYPKLNDFDTVKRIYPKLFDIQDYPLCQFTHPSGAYGEAFLLELGRGCPRRC CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHCCCCHHHH KFCMAKNIYRPPRFKKIEDLKYIAEEGLKHTPVNKIALISPSVGDYKYIVDLCHHIKDIK HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH ENISISPSSLRADTITEELLKILDLKTLTIAPEAGSESLRKFIKKDISEDDIFNALNIAK HCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHC DNRIDKVKLYYMVGLPNETEEDIEEIIKLSQIVKKDFRKVEVSVNPFIPKPKTEFENEPF CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC DLNSKNTIKYIEKSLKKSNIKVSYENFNSMIVQCVLCRGDSDLGEIIEQYNKPVQFLKYL CCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH KKEEFLNNYLERIE HHHHHHHHHHHHCC >Mature Secondary Structure MIKNVALIFPNKFKGGISSLAMQILHHHLNSYNDVNCDMYFMENYKDIKNKDAIIITLQY CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHCCCCCEEEEEEEE ENDYFNVINIINNLKPRNPNAIFIGGGPCAMANPMPLNNYFDAFVVGEIEGTNIMYDLIN CCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCC KEPVENGVYYPKLNDFDTVKRIYPKLFDIQDYPLCQFTHPSGAYGEAFLLELGRGCPRRC CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHCCCCHHHH KFCMAKNIYRPPRFKKIEDLKYIAEEGLKHTPVNKIALISPSVGDYKYIVDLCHHIKDIK HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH ENISISPSSLRADTITEELLKILDLKTLTIAPEAGSESLRKFIKKDISEDDIFNALNIAK HCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHC DNRIDKVKLYYMVGLPNETEEDIEEIIKLSQIVKKDFRKVEVSVNPFIPKPKTEFENEPF CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC DLNSKNTIKYIEKSLKKSNIKVSYENFNSMIVQCVLCRGDSDLGEIIEQYNKPVQFLKYL CCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH KKEEFLNNYLERIE HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]