Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401876

Identifier: 150401876

GI number: 150401876

Start: 1512550

End: 1513854

Strand: Reverse

Name: 150401876

Synonym: Maeo_1454

Alternate gene names: NA

Gene position: 1513854-1512550 (Counterclockwise)

Preceding gene: 150401884

Following gene: 150401875

Centisome position: 96.45

GC content: 27.82

Gene sequence:

>1305_bases
ATGATAAAAAATGTAGCACTAATTTTTCCAAACAAATTTAAAGGTGGCATATCCAGTTTAGCTATGCAAATATTACATCA
TCATCTAAATAGCTACAACGATGTAAATTGCGATATGTATTTTATGGAAAATTATAAGGATATAAAAAATAAAGATGCTA
TAATTATAACACTTCAATATGAAAATGATTATTTTAATGTAATTAATATAATAAATAATTTAAAACCAAGAAATCCAAAT
GCTATTTTTATTGGTGGTGGTCCTTGTGCTATGGCAAACCCAATGCCATTGAATAATTATTTTGATGCCTTTGTTGTAGG
GGAAATAGAGGGAACAAATATAATGTATGATTTAATTAACAAGGAGCCCGTAGAAAATGGAGTATATTATCCAAAATTAA
ACGATTTTGATACTGTAAAAAGAATATATCCAAAATTATTTGATATTCAAGATTACCCATTATGCCAATTTACTCACCCG
TCTGGAGCTTATGGGGAAGCTTTTTTGTTGGAACTGGGAAGAGGTTGCCCAAGAAGATGTAAATTTTGTATGGCAAAAAA
TATATATCGCCCACCACGATTTAAAAAAATAGAGGATTTAAAATATATTGCAGAGGAAGGGCTAAAACATACACCAGTAA
ATAAAATAGCTCTTATAAGTCCATCTGTTGGAGATTATAAATATATAGTTGATTTATGTCATCATATAAAAGATATAAAA
GAAAATATATCAATATCTCCCTCCTCATTAAGGGCCGACACCATAACAGAAGAATTATTAAAAATCCTTGACCTAAAAAC
TCTCACAATAGCACCAGAAGCCGGAAGTGAGAGTTTAAGGAAATTTATTAAAAAAGATATTTCGGAAGACGATATTTTTA
ATGCCTTAAATATAGCAAAAGATAACAGAATAGATAAAGTAAAGCTTTATTATATGGTGGGACTACCCAATGAAACAGAA
GAGGACATTGAAGAAATCATAAAATTATCTCAAATAGTTAAAAAAGATTTTAGGAAGGTTGAAGTTAGTGTAAATCCATT
CATACCAAAACCTAAAACTGAATTTGAAAATGAACCATTTGATTTAAACTCAAAAAATACAATAAAATATATTGAAAAAT
CGTTAAAAAAATCAAATATAAAAGTATCTTATGAGAATTTTAATTCTATGATTGTGCAATGTGTTTTATGTCGTGGAGAT
AGTGATTTAGGGGAGATTATAGAACAATATAATAAACCAGTGCAATTTTTGAAGTATTTGAAAAAAGAAGAATTTTTAAA
TAATTATTTGGAGAGGATTGAATAA

Upstream 100 bases:

>100_bases
CTGACTTTGTGATGAAAGATGGGCGAGCTGACACCGTTTTTTTTAAAAACTGTTTTGAATTTTATAATTTTATTAATATT
CTCTATTTTTTTGTGATATC

Downstream 100 bases:

>100_bases
AAAAGTTTATTCATTTTATTTATGATATATTTTTTTATTTAATATTTATATATATTCTATAAATAATGTTTTATATAGTT
TAAATTTCATATATTATATT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MIKNVALIFPNKFKGGISSLAMQILHHHLNSYNDVNCDMYFMENYKDIKNKDAIIITLQYENDYFNVINIINNLKPRNPN
AIFIGGGPCAMANPMPLNNYFDAFVVGEIEGTNIMYDLINKEPVENGVYYPKLNDFDTVKRIYPKLFDIQDYPLCQFTHP
SGAYGEAFLLELGRGCPRRCKFCMAKNIYRPPRFKKIEDLKYIAEEGLKHTPVNKIALISPSVGDYKYIVDLCHHIKDIK
ENISISPSSLRADTITEELLKILDLKTLTIAPEAGSESLRKFIKKDISEDDIFNALNIAKDNRIDKVKLYYMVGLPNETE
EDIEEIIKLSQIVKKDFRKVEVSVNPFIPKPKTEFENEPFDLNSKNTIKYIEKSLKKSNIKVSYENFNSMIVQCVLCRGD
SDLGEIIEQYNKPVQFLKYLKKEEFLNNYLERIE

Sequences:

>Translated_434_residues
MIKNVALIFPNKFKGGISSLAMQILHHHLNSYNDVNCDMYFMENYKDIKNKDAIIITLQYENDYFNVINIINNLKPRNPN
AIFIGGGPCAMANPMPLNNYFDAFVVGEIEGTNIMYDLINKEPVENGVYYPKLNDFDTVKRIYPKLFDIQDYPLCQFTHP
SGAYGEAFLLELGRGCPRRCKFCMAKNIYRPPRFKKIEDLKYIAEEGLKHTPVNKIALISPSVGDYKYIVDLCHHIKDIK
ENISISPSSLRADTITEELLKILDLKTLTIAPEAGSESLRKFIKKDISEDDIFNALNIAKDNRIDKVKLYYMVGLPNETE
EDIEEIIKLSQIVKKDFRKVEVSVNPFIPKPKTEFENEPFDLNSKNTIKYIEKSLKKSNIKVSYENFNSMIVQCVLCRGD
SDLGEIIEQYNKPVQFLKYLKKEEFLNNYLERIE
>Mature_434_residues
MIKNVALIFPNKFKGGISSLAMQILHHHLNSYNDVNCDMYFMENYKDIKNKDAIIITLQYENDYFNVINIINNLKPRNPN
AIFIGGGPCAMANPMPLNNYFDAFVVGEIEGTNIMYDLINKEPVENGVYYPKLNDFDTVKRIYPKLFDIQDYPLCQFTHP
SGAYGEAFLLELGRGCPRRCKFCMAKNIYRPPRFKKIEDLKYIAEEGLKHTPVNKIALISPSVGDYKYIVDLCHHIKDIK
ENISISPSSLRADTITEELLKILDLKTLTIAPEAGSESLRKFIKKDISEDDIFNALNIAKDNRIDKVKLYYMVGLPNETE
EDIEEIIKLSQIVKKDFRKVEVSVNPFIPKPKTEFENEPFDLNSKNTIKYIEKSLKKSNIKVSYENFNSMIVQCVLCRGD
SDLGEIIEQYNKPVQFLKYLKKEEFLNNYLERIE

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 50175; Mature: 50175

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNVALIFPNKFKGGISSLAMQILHHHLNSYNDVNCDMYFMENYKDIKNKDAIIITLQY
CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHCCCCCEEEEEEEE
ENDYFNVINIINNLKPRNPNAIFIGGGPCAMANPMPLNNYFDAFVVGEIEGTNIMYDLIN
CCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCC
KEPVENGVYYPKLNDFDTVKRIYPKLFDIQDYPLCQFTHPSGAYGEAFLLELGRGCPRRC
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHCCCCHHHH
KFCMAKNIYRPPRFKKIEDLKYIAEEGLKHTPVNKIALISPSVGDYKYIVDLCHHIKDIK
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
ENISISPSSLRADTITEELLKILDLKTLTIAPEAGSESLRKFIKKDISEDDIFNALNIAK
HCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHC
DNRIDKVKLYYMVGLPNETEEDIEEIIKLSQIVKKDFRKVEVSVNPFIPKPKTEFENEPF
CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC
DLNSKNTIKYIEKSLKKSNIKVSYENFNSMIVQCVLCRGDSDLGEIIEQYNKPVQFLKYL
CCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
KKEEFLNNYLERIE
HHHHHHHHHHHHCC
>Mature Secondary Structure
MIKNVALIFPNKFKGGISSLAMQILHHHLNSYNDVNCDMYFMENYKDIKNKDAIIITLQY
CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHCCCCCEEEEEEEE
ENDYFNVINIINNLKPRNPNAIFIGGGPCAMANPMPLNNYFDAFVVGEIEGTNIMYDLIN
CCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCC
KEPVENGVYYPKLNDFDTVKRIYPKLFDIQDYPLCQFTHPSGAYGEAFLLELGRGCPRRC
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHCCCCHHHH
KFCMAKNIYRPPRFKKIEDLKYIAEEGLKHTPVNKIALISPSVGDYKYIVDLCHHIKDIK
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
ENISISPSSLRADTITEELLKILDLKTLTIAPEAGSESLRKFIKKDISEDDIFNALNIAK
HCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHC
DNRIDKVKLYYMVGLPNETEEDIEEIIKLSQIVKKDFRKVEVSVNPFIPKPKTEFENEPF
CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC
DLNSKNTIKYIEKSLKKSNIKVSYENFNSMIVQCVLCRGDSDLGEIIEQYNKPVQFLKYL
CCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
KKEEFLNNYLERIE
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]